RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 SV2CQ496J9 727 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 CAPN7Q9Y6W3 813 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ARIH2O95376 493 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 URODP06132 367 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 DR1Q01658 176 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 SERPINI1Q99574 410 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 HEMGNQ9BXL5 484 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ASPSCR1Q9BZE9 553 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 IP6K2Q9UHH9 426 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 UBXN8O00124 270 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 EIF3DO15371 548 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 KRT38O76015 456 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 LIG3P49916 1009 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 COPS2P61201 443 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 EMC2Q15006 297 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 TDRD10Q5VZ19 366 aaKnown RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 C17orf53Q8N3J3 647 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ZSCAN9O15535 394 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SLC26A2P50443 739 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 EPHB4P54760 987 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 ZKSCAN8Q15776 578 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 EDRF1Q3B7T1 1238 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CCNYL1Q8N7R7 359 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 FAM129AQ9BZQ8 928 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 EPB41L5Q9HCM4 733 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 RAB23Q9ULC3 237 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SLC30A1Q9Y6M5 507 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SYNCRIPO60506 623 aaKnown RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 KCNA2P16389 499 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 YY1P25490 414 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 TMEM143Q96AN5 459 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 MTBPQ96DY7 904 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 PODXLO00592 558 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SSTR3P32745 418 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CCT5P48643 541 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 ANTXR2P58335 489 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 KHDRBS2Q5VWX1 349 aaKnown RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 GPR182O15218 404 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CHRNA3P32297 505 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 TWF1Q12792 350 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 C10orf120Q5SQS8 335 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 PID1Q7Z2X4 250 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 MAML1Q92585 1016 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 MRPS31Q92665 395 aaKnown RBP11.62□□□□□ -0.55
SHANK2-219ENST00000606715 CEP19Q96LK0 163 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 SAYSD1Q9NPB0 183 aa11.62□□□□□ -0.55
SHANK2-219ENST00000606715 COPEO14579 308 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 SLCO1A2P46721 670 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PRKCEQ02156 737 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ELOA2Q8IYF1 753 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PPHLN1Q8NEY8 458 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 MED15Q96RN5 788 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 UNC45AQ9H3U1 944 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 DDX56Q9NY93 547 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 WDR35Q9P2L0 1181 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 IGSF9BQ9UPX0 1349 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ATP8B1O43520 1251 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ATP1A1P05023 1023 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PDGFRBP09619 1106 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 RPS6P62753 249 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ROR1Q01973 937 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ZNF484Q5JVG2 852 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ACAD11Q709F0 780 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 SCAF8Q9UPN6 1271 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PPP3CCP48454 512 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 OAZ1P54368 228 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 DHX9Q08211 1270 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 TROAPQ12815 778 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 CDH18Q13634 790 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 TMEM39AQ9NV64 488 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 TRIM17Q9Y577 477 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 FAM47DPA6NHR8 397 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 DPYDQ12882 1025 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PDCLQ13371 301 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 CRLF3Q8IUI8 442 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 ATPAF2Q8N5M1 289 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 OTULINQ96BN8 352 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 PABPC5Q96DU9 382 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 CHAMP1Q96JM3 812 aa11.61□□□□□ -0.55
SHANK2-219ENST00000606715 DNAJC17Q9NVM6 304 aaKnown RBP11.61□□□□□ -0.55
SHANK2-219ENST00000606715 H0Y626 953 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms