RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RPL9P32969 192 aaKnown RBP21.32■■□□□ 1
SHKBP1-214ENST00000597396 ZBTB6Q15916 424 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 UPP1Q16831 310 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 CBWD2Q8IUF1 395 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 RDH13Q8NBN7 331 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 ASB2Q96Q27 587 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 CLSTN2Q9H4D0 955 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 C2CD2Q9Y426 696 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 SCN1AP35498 2009 aa21.32■■□□□ 1
SHKBP1-214ENST00000597396 TMEM189-UBE2V1I3L0A0 370 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 BIN1O00499 593 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 CXCL14O95715 111 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 NR3C1P04150 777 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 URODP06132 367 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 CTSAP10619 480 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 PRCPP42785 496 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 GUCY2FP51841 1108 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 MRPS5P82675 430 aaKnown RBP21.31■■□□□ 1
SHKBP1-214ENST00000597396 ELAVL2Q12926 359 aaKnown RBP21.31■■□□□ 1
SHKBP1-214ENST00000597396 STIM1Q13586 685 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 SURF1Q15526 300 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 SNRNP35Q16560 246 aaKnown RBP21.31■■□□□ 1
SHKBP1-214ENST00000597396 SPATA1Q5VX52 437 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 NT5DC4Q86YG4 428 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 FBXL18Q96ME1 805 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 GPR62Q9BZJ7 368 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 NUP62CLQ9H1M0 184 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 TRAF3IP3Q9Y228 551 aa21.31■■□□□ 1
SHKBP1-214ENST00000597396 LRPAP1P30533 357 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 USP41Q3LFD5 358 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 COBLL1Q53SF7 1204 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 KIAA1841Q6NSI8 718 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 ADGRD2Q7Z7M1 963 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 EFCAB13Q8IY85 973 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 AUTS2Q8WXX7 1259 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 TLE6Q9H808 572 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 PDE11AQ9HCR9 933 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 KIAA1468Q9P260 1216 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 NUB1Q9Y5A7 615 aa21.3■■□□□ 1
SHKBP1-214ENST00000597396 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 TNFRSF10AO00220 468 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 TRAPPC3O43617 180 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 PPP1R2P41236 205 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 GLUD2P49448 558 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 WNT7BP56706 349 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 TFAMQ00059 246 aaKnown RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 FAM171A1Q5VUB5 890 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 TAS1R1Q7RTX1 841 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 RBM23Q86U06 439 aaKnown RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 SLC9A9Q8IVB4 645 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 RNF168Q8IYW5 571 aaPredicted RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 TMEM130Q8N3G9 435 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 C3orf58Q8NDZ4 430 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 CACTINQ8WUQ7 758 aaKnown RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 TSG101Q99816 390 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 IGFLR1Q9H665 355 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 MRPL17Q9NRX2 175 aaKnown RBP21.29■■□□□ 1
SHKBP1-214ENST00000597396 DPP3Q9NY33 737 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 SSX2IPQ9Y2D8 614 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 BRWD1Q9NSI6 2320 aa21.29■■□□□ 1
SHKBP1-214ENST00000597396 C2orf71A6NGG8 1288 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 HIDE1A8MVS5 230 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 C2CD2LO14523 706 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 TMEM191BP0C7N4 346 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 NR2F2P24468 414 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 RPL13P26373 211 aaKnown RBP21.28■■□□□ 1
SHKBP1-214ENST00000597396 MCM4P33991 863 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 BRCC3P46736 316 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 NRIP1P48552 1158 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 CYP24A1Q07973 514 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 MORC3Q14149 939 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 MYBPC2Q14324 1141 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 CEP135Q66GS9 1140 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 CEP57Q86XR8 500 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 MRPL43Q8N983 215 aaKnown RBP21.28■■□□□ 1
SHKBP1-214ENST00000597396 TRIML1Q8N9V2 468 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 GPT2Q8TD30 523 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 FNBP1Q96RU3 617 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 DMAC2Q9NW81 257 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 FRMD4BQ9Y2L6 1034 aa21.28■■□□□ 1
SHKBP1-214ENST00000597396 PSMA7O14818 248 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 EFEMP2O95967 443 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 MBD3O95983 291 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 IGFBP6P24592 240 aaPredicted RBP21.27■■□□□ 1
SHKBP1-214ENST00000597396 HYAL1Q12794 435 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 PTPN14Q15678 1187 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 NFIL3Q16649 462 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 EP400NLQ6ZTU2 488 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 ADSSL1Q8N142 457 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 ADAMTS19Q8TE59 1207 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 ANKRD36BP1Q96IX9 119 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 B3GALT6Q96L58 329 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 IRAK3Q9Y616 596 aa21.27■■□□□ 1
SHKBP1-214ENST00000597396 I3L4J1 428 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 PER2O15055 1255 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 TNNC2P02585 160 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 DLATP10515 647 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 TNNI1P19237 187 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 DSG1Q02413 1049 aa21.26■□□□□ 0.99
SHKBP1-214ENST00000597396 PSMD6Q15008 389 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms