RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SLC38A7Q9NVC3 462 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 HCFC1R1Q9NWW0 138 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 CLIC4Q9Y696 253 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 R4GN57 208 aa19.21■□□□□ 0.67
SHKBP1-203ENST00000594298 PP2D1A8MPX8 630 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 NPTX2P47972 431 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 SNW1Q13573 536 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 MLF2Q15773 248 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 SLC44A4Q53GD3 710 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 CEP120Q8N960 986 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 ZNF461Q8TAF7 563 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 KCNG4Q8TDN1 519 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 CALML4Q96GE6 196 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 OSBPL6Q9BZF3 934 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 ARHGAP28Q9P2N2 729 aa19.2■□□□□ 0.66
SHKBP1-203ENST00000594298 ARHGEF37A1IGU5 675 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 CCDC169A6NNP5 214 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 CDC25AP30304 524 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 BRCC3P46736 316 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 PEX3P56589 373 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 SOX4Q06945 474 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 ZNF568Q3ZCX4 644 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 HYIQ5T013 277 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 FAM173BQ6P4H8 233 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 MAML2Q8IZL2 1156 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 DAW1Q8N136 415 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 MRPL4Q9BYD3 311 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 C17orf75Q9HAS0 396 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 GDE1Q9NZC3 331 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 RBM19Q9Y4C8 960 aaKnown RBP19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 VWA8A3KMH1 1905 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 FAM186AA6NE01 2351 aa19.19■□□□□ 0.66
SHKBP1-203ENST00000594298 RIF1Q5UIP0 2472 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 I3L4J1 428 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 SYN3O14994 580 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 TBC1D4O60343 1298 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 ECI2O75521 394 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 ABLIM3O94929 683 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 RHOP08100 348 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 MCF2P10911 925 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 KCNE1P15382 129 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 PROZP22891 400 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 ROR1Q01973 937 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 DMP1Q13316 513 aaPredicted RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 PTPAQ15257 358 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 TAS1R3Q7RTX0 852 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 RASSF8Q8NHQ8 419 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 DRC1Q96MC2 740 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 ZMAT2Q96NC0 199 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 KXD1Q9BQD3 176 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 MMTAG2Q9BU76 263 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 BCO2Q9BYV7 579 aa19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 MRPS23Q9Y3D9 190 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 SRPRBQ9Y5M8 271 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-203ENST00000594298 E9PMD0 336 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 PODXLO00592 558 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 ABLIM1O14639 778 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 HIP1RO75146 1068 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 LRRN2O75325 713 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 F13A1P00488 732 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 RPL9P32969 192 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 MAGEA9P43362 315 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 STK38Q15208 465 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 SLC5A9Q2M3M2 681 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 ZNF528Q3MIS6 628 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 VARS2Q5ST30 1063 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 ATL3Q6DD88 541 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 USP28Q96RU2 1077 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 NTPCRQ9BSD7 190 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 KMT5AQ9NQR1 393 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 CNTN3Q9P232 1028 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 FBXO4Q9UKT5 387 aa19.17■□□□□ 0.66
SHKBP1-203ENST00000594298 WDR27A2RRH5 827 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 MICAL2O94851 1124 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 ATF2P15336 505 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 PTPN2P17706 415 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 MARCKSP29966 332 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 ELF1P32519 619 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 TXLNAP40222 546 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 NASPP49321 788 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 OSTNP61366 133 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 MAPK7Q13164 816 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 FOXD4L5Q5VV16 416 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 C1orf186Q6ZWK4 172 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 TCEAL8Q8IYN2 117 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 FOXD4L4Q8WXT5 416 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 ING5Q8WYH8 240 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 RUSC1Q9BVN2 902 aa19.16■□□□□ 0.66
SHKBP1-203ENST00000594298 TIPINQ9BVW5 301 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms