RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 ZC3H11AO75152 810 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS25-205ENST00000590339 LDHAP00338 332 aaKnown RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 PRKCBP05771 671 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 PROZP22891 400 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 WNT7BP56706 349 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 POU5F1BQ06416 359 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 RAB30Q15771 203 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 TRIM71Q2Q1W2 868 aaKnown RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 PAPD7Q5XG87 772 aaKnown RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 TRAPPC11Q7Z392 1133 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 TMCO2Q7Z6W1 182 aaPredicted RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 BRSK2Q8IWQ3 736 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 ZBTB8OSQ8IWT0 167 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 SLC30A5Q8TAD4 765 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 LNX1Q8TBB1 728 aaPredicted RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 SHC3Q92529 594 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 TSC1Q92574 1164 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 SEMA4DQ92854 862 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 CGRRF1Q99675 332 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 FAM213AQ9BRX8 229 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 MRPL4Q9BYD3 311 aaKnown RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 SUCLA2Q9P2R7 463 aaPredicted RBP10.15□□□□□ -0.78
VPS25-205ENST00000590339 CAPN6Q9Y6Q1 641 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 NCANO14594 1321 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 PTPRJQ12913 1337 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 DDX3XO00571 662 aaKnown RBP eCLIP10.14□□□□□ -0.799e-14■■■□□ 17.4
VPS25-205ENST00000590339 MAGEB2O15479 319 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 ASAP2O43150 1006 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 LRRN2O75325 713 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TOM1L1O75674 476 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 CTSHP09668 335 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 GNAT1P11488 350 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 INSRRP14616 1297 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 IGFBP4P22692 258 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 CLCN3P51790 818 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 PTENP60484 403 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 IGBP1P78318 339 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 ARID5AQ03989 594 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 MBTD1Q05BQ5 628 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 MCL1Q07820 350 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TFDP1Q14186 410 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 NAB2Q15742 525 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 WHAMMP3Q1A5X7 153 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TCTN1Q2MV58 587 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 ZACNQ401N2 412 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 SERINC5Q86VE9 423 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 RNF10Q8N5U6 811 aaKnown RBP10.14□□□□□ -0.79
VPS25-205ENST00000590339 FBXL13Q8NEE6 735 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TRIM58Q8NG06 486 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 MAFAQ8NHW3 353 aaPredicted RBP10.14□□□□□ -0.79
VPS25-205ENST00000590339 HELQQ8TDG4 1101 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 TAS1R2Q8TE23 839 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 CCDC127Q96BQ5 260 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 ZBTB45Q96K62 511 aaPredicted RBP10.14□□□□□ -0.79
VPS25-205ENST00000590339 KREMEN1Q96MU8 473 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 ACO2Q99798 780 aaKnown RBP10.14□□□□□ -0.79
VPS25-205ENST00000590339 ZBED2Q9BTP6 218 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 MSTO1Q9BUK6 570 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 CARD6Q9BX69 1037 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 FZD8Q9H461 694 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 PTPRHQ9HD43 1115 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 SALL4Q9UJQ4 1053 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 INTUQ9ULD6 942 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 DUSP10Q9Y6W6 482 aa10.14□□□□□ -0.79
VPS25-205ENST00000590339 MACROD2A1Z1Q3 448 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 EFCAB8A8MWE9 144 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 ACKR2O00590 384 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 TACC1O75410 805 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 C4BPAP04003 597 aaKnown RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 CCDC172P0C7W6 258 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 GCNT1Q02742 428 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 IKBKEQ14164 716 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 MBTPS1Q14703 1052 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 MAPK6Q16659 721 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 AMHR2Q16671 573 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 ZBTB41Q5SVQ8 909 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 PPP2R2DQ66LE6 453 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 SMYD5Q6GMV2 418 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 EFCAB12Q6NXP0 572 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 CNKSR3Q6P9H4 555 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 RSRC2Q7L4I2 434 aaKnown RBP10.13□□□□□ -0.79
VPS25-205ENST00000590339 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 HERC6Q8IVU3 1022 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 FAM71AQ8IYT1 594 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 DBF4BQ8NFT6 615 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 ZNF516Q92618 1163 aa10.13□□□□□ -0.79
VPS25-205ENST00000590339 KAT5Q92993 513 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms