RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RUNDC3BQ96NL0 473 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 TSPAN18Q96SJ8 248 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 PCDHB18PQ96TA0 734 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 PTPN18Q99952 460 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 ZNF518BQ9C0D4 1074 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 SLITRK6Q9H5Y7 841 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 STIM2Q9P246 746 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 ALG6Q9Y672 507 aa11.13□□□□□ -0.63
VPS25-203ENST00000589520 SIP14410 1827 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 A6NJR5 290 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 CYP1A1P04798 512 aaPredicted RBP11.12□□□□□ -0.63
VPS25-203ENST00000589520 MMEP08473 750 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 SMPD1P17405 629 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 CTNNA2P26232 953 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ATICP31939 592 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 NSFP46459 744 aaKnown RBP11.12□□□□□ -0.63
VPS25-203ENST00000589520 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
VPS25-203ENST00000589520 CENPCQ03188 943 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 C2orf54Q08AI8 447 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ZNF568Q3ZCX4 644 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 EMBQ6PCB8 327 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ZNF653Q96CK0 615 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 IFT122Q9HBG6 1241 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
VPS25-203ENST00000589520 OSGEPQ9NPF4 335 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 GDF3Q9NR23 364 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 TAS2R14Q9NYV8 317 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
VPS25-203ENST00000589520 AKT3Q9Y243 479 aa11.12□□□□□ -0.63
VPS25-203ENST00000589520 NRCAMQ92823 1304 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 GOLGA6L10A0A0M3HER8 536 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 KPNA6O60684 536 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 TFRCP02786 760 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 EDN1P05305 212 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 P4HA1P13674 534 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 AXLP30530 894 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 GNA15P30679 374 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 RGS2P41220 211 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 ZNF157P51786 506 aaPredicted RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 CLCN3P51790 818 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 EPHB4P54760 987 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 GRIK4Q16099 956 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 DCAF4L1Q3SXM0 396 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 CST9Q5W186 159 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 EFCAB13Q8IY85 973 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 UBR7Q8N806 425 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 MAIP1Q8WWC4 291 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 PSMB7Q99436 277 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 LRRC1Q9BTT6 524 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 PI4K2AQ9BTU6 479 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 KATNAL1Q9BW62 490 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 APOBEC3GQ9HC16 384 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 ZFYVE28Q9HCC9 887 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 CNOT8Q9UFF9 292 aaKnown RBP11.11□□□□□ -0.63
VPS25-203ENST00000589520 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS25-203ENST00000589520 SCINQ9Y6U3 715 aa11.11□□□□□ -0.63
VPS25-203ENST00000589520 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 KRIT1O00522 736 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 MED7O43513 233 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 CPT1AP50416 773 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 ZNF132P52740 706 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 IGBP1P78318 339 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 SREBF2Q12772 1141 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 PAK2Q13177 524 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 CUL1Q13616 776 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 CASP8Q14790 479 aa11.1□□□□□ -0.63
VPS25-203ENST00000589520 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
VPS25-203ENST00000589520 ZBTB41Q5SVQ8 909 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms