RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 PHACTR2O75167 634 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 RTN2O75298 545 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 DUSP11O75319 330 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 TFRCP02786 760 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 CYBAP13498 195 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 ACO1P21399 889 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 PDE6CP51160 858 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 FMO1Q01740 532 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 PCBP1Q15365 356 aaKnown RBP eCLIP30.53■■■□□ 2.486e-11■■■■■ 51.3
CTDNEP1-210ENST00000574322 SLFN11Q7Z7L1 901 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 GPR161Q8N6U8 529 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 TPCN2Q8NHX9 752 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 CTNNBL1Q8WYA6 563 aaPredicted RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 PCDHB18PQ96TA0 734 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 KATNAL1Q9BW62 490 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 RPF1Q9H9Y2 349 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 TAS2R14Q9NYV8 317 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 A0A1B0GUA9 196 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 SRGAP2O75044 1071 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 NOP14P78316 857 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 ZNF572Q7Z3I7 529 aaPredicted RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 MTERF4Q7Z6M4 381 aaKnown RBP30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 ZNF677Q86XU0 584 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 DNAAF5Q86Y56 855 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 OSBPL9Q96SU4 736 aa30.53■■■□□ 2.48
CTDNEP1-210ENST00000574322 HADHBP55084 474 aaKnown RBP30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 MAP3K21Q5TCX8 1036 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 CREG2Q8IUH2 290 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 CEP120Q8N960 986 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 TRPV1Q8NER1 839 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 ARID3AQ99856 593 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 IMPG2Q9BZV3 1241 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 MTMR12Q9C0I1 747 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 SEPT11Q9NVA2 429 aaKnown RBP30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 NUB1Q9Y5A7 615 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 PCDHB2Q9Y5E7 798 aa30.52■■■□□ 2.48
CTDNEP1-210ENST00000574322 KPNA6O60684 536 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 GPR32O75388 356 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 CSDE1O75534 798 aaKnown RBP30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 HOXC8P31273 242 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 FSCN1Q16658 493 aaKnown RBP30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 SGSM1Q2NKQ1 1148 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 SPOPLQ6IQ16 392 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 CDR2LQ86X02 465 aaPredicted RBP30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 EFCAB13Q8IY85 973 aa30.51■■■□□ 2.47
CTDNEP1-210ENST00000574322 CST3P01034 146 aaPredicted RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 STAG3L1P0CL83 205 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 NOP2P46087 812 aaKnown RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 RBM10P98175 930 aaKnown RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 UBR7Q8N806 425 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 ELMO3Q96BJ8 720 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 PPP1R16BQ96T49 567 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 MCOLN1Q9GZU1 580 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 ASB7Q9H672 318 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 ERLIN2O94905 339 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 FTLP02792 175 aaPredicted RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 MMEP08473 750 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 KRT5P13647 590 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 NKX3-2P78367 333 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 IRX5P78411 483 aaPredicted RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 ITIH3Q06033 890 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 TEX35Q5T0J7 233 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 SYCE1Q8N0S2 351 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 SCLT1Q96NL6 688 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 MMS19Q96T76 1030 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 GCOM2Q9BZD3 368 aaPredicted RBP30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 ACP6Q9NPH0 428 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 RNF14Q9UBS8 474 aa30.5■■■□□ 2.47
CTDNEP1-210ENST00000574322 TMCO5BA8MYB1 307 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 MYL3P08590 195 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 CYP2C9P11712 490 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 H2AFXP16104 143 aaPredicted RBP30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 CCND3P30281 292 aaPredicted RBP30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 PURAQ00577 322 aaKnown RBP30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 RHOT2Q8IXI1 618 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 SLC35G2Q8TBE7 412 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 FAM212AQ96EL1 285 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 FAXDC2Q96IV6 333 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 ANKRD36BP1Q96IX9 119 aa30.49■■■□□ 2.47
CTDNEP1-210ENST00000574322 CENPFP49454 3210 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 TNNC2P02585 160 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 TMEM191BP0C7N4 346 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 CXCL8P10145 99 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 GJA9P57773 515 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 HIC1Q14526 733 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 TMEM192Q8IY95 271 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 CPB2Q96IY4 423 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 THAP2Q9H0W7 228 aa30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 HMX1Q9NP08 348 aaPredicted RBP30.48■■■□□ 2.47
CTDNEP1-210ENST00000574322 CES2O00748 559 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 ZNF185O15231 689 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 NCK2O43639 380 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 BEX3Q00994 111 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 TAF3Q5VWG9 929 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 COG1Q8WTW3 980 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 TAF4BQ92750 862 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 UPF3AQ9H1J1 476 aaKnown RBP30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 MEFVO15553 781 aaPredicted RBP30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 FTCDO95954 541 aa30.47■■■□□ 2.47
CTDNEP1-210ENST00000574322 MYCP01106 439 aaPredicted RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms