RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MYD88Q99836 296 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 FOXB1Q99853 325 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 COA1Q9GZY4 146 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 SEMA4AQ9H3S1 761 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 C11orf49Q9H6J7 331 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 ZIM2Q9NZV7 527 aa6.62□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF804BA4D1E1 1349 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF839A8K0R7 811 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 HTATSF1O43719 755 aaKnown RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PLIN1O60240 522 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 MT-CO1P00395 513 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PRLP01236 227 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 NCAM1P13591 858 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PTGS1P23219 599 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 MANFP55145 182 aaKnown RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 CACNB2Q08289 660 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 SNAPC2Q13487 334 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 CCDC152Q4G0S7 254 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 FAM109BQ6ICB4 259 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 ESPNLQ6ZVH7 1005 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 ZNF605Q86T29 641 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 FAM26EQ8N5C1 309 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PLBD2Q8NHP8 589 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PNISRQ8TF01 805 aaKnown RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 SNX27Q96L92 541 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 WRNIP1Q96S55 665 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.61□□□□□ -1.35
SF3B3-214ENST00000572365 POFUT1Q9H488 388 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 EPHX3Q9H6B9 360 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 GREM2Q9H772 168 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 TCF7L1Q9HCS4 588 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 CD209Q9NNX6 404 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 ARHGAP28Q9P2N2 729 aa6.61□□□□□ -1.35
SF3B3-214ENST00000572365 PFASO15067 1338 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 MYO3BQ8WXR4 1341 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 ELL2O00472 640 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 NFIBO00712 420 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 PEX10O60683 326 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 SCGB1D2O95969 90 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 C8BP07358 591 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 ENPP1P22413 925 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 MC4RP32245 332 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 ALDH6A1Q02252 535 aaKnown RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 PCBP2Q15366 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 TIGD7Q6NT04 549 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 PGM2L1Q6PCE3 622 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 KANSL1Q7Z3B3 1105 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 ERO1BQ86YB8 467 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 FAM168AQ92567 244 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 TSR2Q969E8 191 aaKnown RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 LIN37Q96GY3 246 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 TUBGCP5Q96RT8 1024 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 CCM2LQ9NUG4 571 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-214ENST00000572365 UCKL1Q9NWZ5 548 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 KCNG1Q9UIX4 513 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 WASF3Q9UPY6 502 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 NUDCQ9Y266 331 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 FAN1Q9Y2M0 1017 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 CFAP54Q96N23 3096 aa6.6□□□□□ -1.35
SF3B3-214ENST00000572365 MED23Q9ULK4 1368 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 ADGRA2Q96PE1 1338 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 TNPO2O14787 897 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PCDHGA12O60330 932 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PRPF6O94906 941 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 KCNJ4P48050 445 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 PFKPQ01813 784 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 ROM1Q03395 351 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 MYBPC3Q14896 1274 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 LRRC41Q15345 812 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 TARBP2Q15633 366 aaKnown RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 TMEM240Q5SV17 173 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 VASNQ6EMK4 673 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 AMOTL1Q8IY63 956 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 DTX3Q8N9I9 347 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 CFAP53Q96M91 514 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 UHRF1Q96T88 793 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 LBHD1Q9BQE6 289 aaPredicted RBP6.59□□□□□ -1.35
SF3B3-214ENST00000572365 LRFN3Q9BTN0 628 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 MYL10Q9BUA6 226 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 AMNQ9BXJ7 453 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 SLC39A2Q9NP94 309 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 INCENPQ9NQS7 918 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 MKS1Q9NXB0 559 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 GALNT8Q9NY28 637 aa6.59□□□□□ -1.35
SF3B3-214ENST00000572365 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms