RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
USB1-208ENST00000563207 USTQ9Y2C2 406 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
USB1-208ENST00000563207 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
USB1-208ENST00000563207 GADD45BO75293 160 aaPredicted RBP17.11■□□□□ 0.33
USB1-208ENST00000563207 NR1I2O75469 434 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 THP07101 528 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 IDEP14735 1019 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 AFMP43652 599 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 OSTNP61366 133 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 ASIC1P78348 528 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
USB1-208ENST00000563207 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
USB1-208ENST00000563207 ATF7IP2Q5U623 682 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 CCDC149Q6ZUS6 474 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 STAMQ92783 540 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 MYADMQ96S97 322 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 ZHX3Q9H4I2 956 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 PANK4Q9NVE7 773 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
USB1-208ENST00000563207 ZDBF2Q9HCK1 2354 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 I3L4J1 428 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 ALCAMQ13740 583 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 C3orf58Q8NDZ4 430 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
USB1-208ENST00000563207 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
USB1-208ENST00000563207 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
USB1-208ENST00000563207 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
USB1-208ENST00000563207 KCNH6Q9H252 994 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 KCNK12Q9HB15 430 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 SSX2IPQ9Y2D8 614 aa17.1■□□□□ 0.33
USB1-208ENST00000563207 DOCK8Q8NF50 2099 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 SLC16A4O15374 487 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 CLCNKBP51801 687 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 NTHL1P78549 312 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 GTF2BQ00403 316 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 STRN3Q13033 797 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 SEZ6Q53EL9 994 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 RSPO2Q6UXX9 243 aaPredicted RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 STXBP4Q6ZWJ1 553 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 HAUS6Q7Z4H7 955 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 UBALD2Q8IYN6 164 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 CCDC47Q96A33 483 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 TARS2Q9BW92 718 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 CDT1Q9H211 546 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 WDR6Q9NNW5 1121 aaKnown RBP17.09■□□□□ 0.33
USB1-208ENST00000563207 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 PCDHB13Q9Y5F0 798 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
USB1-208ENST00000563207 CLUHO75153 1309 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.32
USB1-208ENST00000563207 ABLIM1O14639 778 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 GBP2P32456 591 aaPredicted RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 PSMD2Q13200 908 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 CUL4BQ13620 913 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 ZNF720Q7Z2F6 126 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 ACSF2Q96CM8 615 aaPredicted RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 ZMAT2Q96NC0 199 aaKnown RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 MRPL4Q9BYD3 311 aaKnown RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 MRPL44Q9H9J2 332 aaKnown RBP17.08■□□□□ 0.32
USB1-208ENST00000563207 LMBRD1Q9NUN5 540 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
USB1-208ENST00000563207 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 H0Y858 1186 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 K7ENM7 598 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 PI15O43692 258 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 NPR3P17342 541 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 BRCC3P46736 316 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 EHHADHQ08426 723 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 POSTNQ15063 836 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 PSMD5Q16401 504 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 BLZF1Q9H2G9 400 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 TBX20Q9UMR3 447 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
USB1-208ENST00000563207 ZMYND10O75800 440 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 PAPLNO95428 1278 aa17.06■□□□□ 0.32
USB1-208ENST00000563207 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
USB1-208ENST00000563207 TKTP29401 623 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms