RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 STK4Q13043 487 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 USP41Q3LFD5 358 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 RTP2Q5QGT7 225 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 FAM171A1Q5VUB5 890 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 JADE1Q6IE81 842 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
USP8-212ENST00000560730 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 RIN2Q8WYP3 895 aaPredicted RBP13.14□□□□□ -0.31
USP8-212ENST00000560730 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
USP8-212ENST00000560730 UROC1Q96N76 676 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 STK39Q9UEW8 545 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 HCFC2Q9Y5Z7 792 aa13.14□□□□□ -0.31
USP8-212ENST00000560730 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■■■■■ 35.7
USP8-212ENST00000560730 GRXCR2A6NFK2 248 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 TEX28O15482 410 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 RPN1P04843 607 aaKnown RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 EPCAMP16422 314 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 PTCRAQ6ISU1 281 aaPredicted RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 KIAA1841Q6NSI8 718 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 EXOC1Q9NV70 894 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 CD207Q9UJ71 328 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 PPEF2O14830 753 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 CLIC2O15247 247 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 MYL1P05976 194 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 IL9P15248 144 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 FGFR3P22607 806 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 KLRC2P26717 231 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 PNOCQ13519 176 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 BMT2Q1RMZ1 405 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 ANKRD54Q6NXT1 300 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 TTPALQ9BTX7 342 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
USP8-212ENST00000560730 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
USP8-212ENST00000560730 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 ADAM12O43184 909 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 MBTPS2O43462 519 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 EXTL3O43909 919 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 CYP3A5P20815 502 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 TKTP29401 623 aaKnown RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 LRPAP1P30533 357 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 CLCN4P51793 760 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 PSMD2Q13200 908 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 TMEM132DQ14C87 1099 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 SPATA1Q5VX52 437 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 CD302Q8IX05 232 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 LNX1Q8TBB1 728 aaPredicted RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 ADAMTS19Q8TE59 1207 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
USP8-212ENST00000560730 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 S1PR5Q9H228 398 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 ASB7Q9H672 318 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 AGPAT3Q9NRZ7 376 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 HSPBP1Q9NZL4 362 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 CDH22Q9UJ99 828 aa13.12□□□□□ -0.31
USP8-212ENST00000560730 UBE4BO95155 1302 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 SPATA31D3P0C874 917 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 PSMD5Q16401 504 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 RSPO2Q6UXX9 243 aaPredicted RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.11□□□□□ -0.31
USP8-212ENST00000560730 SPATA31D4Q6ZUB0 917 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 PALB2Q86YC2 1186 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 GPR65Q8IYL9 337 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
USP8-212ENST00000560730 BEST2Q8NFU1 509 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms