RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 GIT1Q9Y2X7 761 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 PCDHB2Q9Y5E7 798 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 PCNTO95613 3336 aa11.72□□□□□ -0.53
PABPN1-203ENST00000553960 A0A0A6YYK5 440 aaPredicted RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 FOXN3O00409 490 aaPredicted RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 IPO7O95373 1038 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 CXCL8P10145 99 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 CKBP12277 381 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 ACO1P21399 889 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 LRPAP1P30533 357 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 GJA8P48165 433 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 VAV2P52735 878 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 YARSP54577 528 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 NOP14P78316 857 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 KLHL30Q0D2K2 578 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 CUL2Q13617 745 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 LPIN1Q14693 890 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 ASIC2Q16515 512 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 PTPN21Q16825 1174 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 DPH6Q7L8W6 267 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 THNSL1Q8IYQ7 743 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 CEP120Q8N960 986 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 C1orf127Q8N9H9 656 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 APBB2Q92870 758 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 TSGA10Q9BZW7 698 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 ELAC1Q9H777 363 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 NLRC4Q9NPP4 1024 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 SIX4Q9UIU6 781 aa11.71□□□□□ -0.53
PABPN1-203ENST00000553960 UBQLN1Q9UMX0 589 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 REXO2Q9Y3B8 237 aaKnown RBP11.71□□□□□ -0.53
PABPN1-203ENST00000553960 PIRO00625 290 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 CXCL10P02778 98 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM191BP0C7N4 346 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 SELPP16109 830 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 EIF4A3P38919 411 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 PNPLA4P41247 253 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 KIF11P52732 1056 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ETF1P62495 437 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 RBP5P82980 135 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 PTK2Q05397 1052 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 INCA1Q0VD86 236 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 NAB2Q15742 525 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ZBTB33Q86T24 672 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ARHGEF19Q8IW93 802 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ISCUQ9H1K1 167 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 FAM105AQ9NUU6 356 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 SLC38A7Q9NVC3 462 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 NOCTQ9UK39 431 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 PADI3Q9ULW8 664 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
PABPN1-203ENST00000553960 IPPQ9Y573 584 aa11.7□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF263O14978 683 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 CSDE1O75534 798 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 RECQL4O94761 1208 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 NPTXRO95502 500 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 PAEPP09466 180 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 P4HA1P13674 534 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 THPOP40225 353 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 ARHGAP25P42331 645 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 PIK3CAP42336 1068 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 GOLGA8FQ08AF8 430 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 GOLGA8DPQ0D2H9 430 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TUBB2AQ13885 445 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 SPA17Q15506 151 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF618Q5T7W0 954 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TRIM72Q6ZMU5 477 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TOGARAM2Q6ZUX3 1019 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 ZNF571Q7Z3V5 609 aaPredicted RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 TMEM192Q8IY95 271 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 BEST2Q8NFU1 509 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 EPS8L1Q8TE68 723 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
PABPN1-203ENST00000553960 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 DEFB118Q96PH6 123 aa11.69□□□□□ -0.54
PABPN1-203ENST00000553960 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms