RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CRABP2P29373 138 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 EIF4A3P38919 411 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 MLH1P40692 756 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 RGS2P41220 211 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 EIF4A1P60842 406 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 IFI35P80217 286 aaPredicted RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PDE1BQ01064 536 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PFKPQ01813 784 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CYP4A11Q02928 519 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PTPN12Q05209 780 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 MOGSQ13724 837 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 AUHQ13825 339 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 DDB1Q16531 1140 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 P3H1Q32P28 736 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 USP41Q3LFD5 358 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 RABL6Q3YEC7 729 aaPredicted RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 KHDC1Q4VXA5 237 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 SLC44A4Q53GD3 710 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM91A1Q658Y4 838 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 DUPD1Q68J44 220 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 TMEM53Q6P2H8 277 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 VSTM1Q6UX27 236 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CEP128Q6ZU80 1094 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 EXOC8Q8IYI6 725 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 DTWD1Q8N5C7 304 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PI4KAP1Q8N8J0 262 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 LRRC57Q8N9N7 239 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 LRRC8CQ8TDW0 803 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 GIPC2Q8TF65 315 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 GFM2Q969S9 779 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 DGCR14Q96DF8 476 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ABHD8Q96I13 439 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CLMNQ96JQ2 1002 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC42Q96M95 316 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PRMT1Q99873 361 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PYM1Q9BRP8 204 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CENPKQ9BS16 269 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ROPN1BQ9BZX4 212 aaPredicted RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF576Q9H609 170 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ROPN1Q9HAT0 212 aaPredicted RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 SUCLA2Q9P2R7 463 aaPredicted RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PARP2Q9UGN5 583 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 R3HDM2Q9Y2K5 976 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 TIMM22Q9Y584 194 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PCDHA3Q9Y5H8 950 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 SPO11Q9Y5K1 396 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 FADS3Q9Y5Q0 445 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 UMODL1Q5DID0 1318 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ALKQ9UM73 1620 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 SIGLEC1Q9BZZ2 1709 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SPEF2Q9C093 1822 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 MYO5BQ9ULV0 1848 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 A0A088AWK7 358 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 TMEM238LA0A1B0GVL6 79 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 F8W8V4 182 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 H3BRJ5 948 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 EIF3FO00303 357 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PIK3R2O00459 728 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CETN3O15182 167 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RNF113AO15541 343 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 BUD23O43709 281 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SUPT3HO75486 399 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 BMP15O95972 392 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ZBED1O96006 694 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PLEKP08567 350 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SMIM18P0DKX4 95 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF16P17020 682 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 TAC1P20366 129 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PTPN4P29074 926 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 STIP1P31948 543 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CXCR5P32302 372 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 HALP42357 657 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PRCPP42785 496 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RAP1GDS1P52306 607 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RCAN1P53805 252 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 POLGP54098 1239 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SLC18A1P54219 525 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 MTTPP55157 894 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ADARP55265 1226 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ZC3H6P61129 1189 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 DAB2P98082 770 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RASSF7Q02833 373 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RELAQ04206 551 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 NEXNQ0ZGT2 675 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 KCNMA1Q12791 1236 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 MAP7Q14244 749 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SPCS2Q15005 226 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 R3HDM1Q15032 1099 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CFAP157Q5JU67 520 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 IL23RQ5VWK5 629 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RRAGBQ5VZM2 374 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PDXDC1Q6P996 788 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 KLHL35Q6PF15 583 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms