RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 SLC7A14Q8TBB6 771 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 ZMAT2Q96NC0 199 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 MYADMQ96S97 322 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 RPF1Q9H9Y2 349 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 WNT16Q9UBV4 365 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 STK17AQ9UEE5 414 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 CDH7Q9ULB5 785 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 KCNH3Q9ULD8 1083 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 TBX20Q9UMR3 447 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 UBQLN1Q9UMX0 589 aaKnown RBP10.21□□□□□ -0.77
YBX3-218ENST00000546298 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
YBX3-218ENST00000546298 I3L4J1 428 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 PRRG1O14668 218 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 OGTO15294 1046 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 CCL16O15467 120 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 N4BP1O75113 896 aaKnown RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 SRFP11831 508 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SYT1P21579 422 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 RFX1P22670 979 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 PAX3P23760 479 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 PTPAQ15257 358 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 CTXN3Q4LDR2 81 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SEZ6Q53EL9 994 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 TPGS2Q68CL5 300 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SLFN12LQ6IEE8 588 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SLC8B1Q6J4K2 584 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 ZNF280DQ6N043 979 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 C3orf58Q8NDZ4 430 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 C18orf25Q96B23 403 aaPredicted RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SUSD3Q96L08 255 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 RTP3Q9BQQ7 232 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 MSTO1Q9BUK6 570 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 OXCT2Q9BYC2 517 aaPredicted RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 BACH2Q9BYV9 841 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SMOC2Q9H3U7 446 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 ZSCAN16Q9H4T2 348 aaPredicted RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 MAFFQ9ULX9 164 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 SRPRBQ9Y5M8 271 aaKnown RBP10.2□□□□□ -0.78
YBX3-218ENST00000546298 CLIC4Q9Y696 253 aa10.2□□□□□ -0.78
YBX3-218ENST00000546298 MUC6Q6W4X9 2439 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 A0A0B4J269 797 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 TTC26A0AVF1 554 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 ANHXE9PGG2 379 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 STK25O00506 426 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 GALR2O43603 387 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 ABLIM3O94929 683 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 LRG1P02750 347 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 CXCL8P10145 99 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 PDIA4P13667 645 aaKnown RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 ATF2P15336 505 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 IGFBP6P24592 240 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 LRPAP1P30533 357 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 MRE11P49959 708 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 ARPP19P56211 112 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 GTF2BQ00403 316 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 GRIN1Q05586 938 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 TCF15Q12870 199 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 RESTQ13127 1097 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 MRPL58Q14197 206 aaKnown RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 POSTNQ15063 836 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 PABPC1LQ4VXU2 614 aaKnown RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 RRAGBQ5VZM2 374 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 RSPO2Q6UXX9 243 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 MTSS1LQ765P7 747 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 SV2BQ7L1I2 683 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 USP37Q86T82 979 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 FLCNQ8NFG4 579 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 RSAD2Q8WXG1 361 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 ATOH1Q92858 354 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 EPSTI1Q96J88 318 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 ST6GALNAC4Q9H4F1 302 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 FBXO2Q9UK22 296 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 FBXL5Q9UKA1 691 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 MORC2Q9Y6X9 1032 aaPredicted RBP10.19□□□□□ -0.78
YBX3-218ENST00000546298 ARID2Q68CP9 1835 aa10.19□□□□□ -0.78
YBX3-218ENST00000546298 ARHGEF37A1IGU5 675 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 LACTBL1A8MY62 500 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 K7ELQ4 463 aaPredicted RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 ZNF197O14709 1029 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 MEFVO15553 781 aaPredicted RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 TBC1D4O60343 1298 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 ADRB2P07550 413 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 CFHP08603 1231 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 GAP43P17677 238 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 PTPN2P17706 415 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 AOC1P19801 751 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 NMT1P30419 496 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 NTHL1P78549 312 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 POU5F1Q01860 360 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 ROR1Q01973 937 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 CEBPZQ03701 1054 aaKnown RBP10.18□□□□□ -0.78
YBX3-218ENST00000546298 HTR4Q13639 388 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 ZBTB6Q15916 424 aa10.18□□□□□ -0.78
YBX3-218ENST00000546298 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms