RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PALB2Q86YC2 1186 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PDILTQ8N807 584 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HDAC7Q8WUI4 952 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RPGRIP1Q96KN7 1286 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SNX27Q96L92 541 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RIPOR3Q96MK2 946 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FIZ1Q96SL8 496 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LRRC27Q9C0I9 530 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HAPLN2Q9GZV7 340 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CNTN3Q9P232 1028 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SEL1LQ9UBV2 794 aa10.62□□□□□ -0.71
TNFRSF1A-214ENST00000543048 A0A087X0B3 334 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 A0A0B4J269 797 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HNRNPDLO14979 420 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 OGTO15294 1046 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GLUD1P00367 558 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FGFR3P22607 806 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 AMPD3Q01432 767 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PKP1Q13835 747 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ZC2HC1CQ53FD0 456 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HERC4Q5GLZ8 1057 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SLFN12LQ6IEE8 588 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LILRA6Q6PI73 481 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CD300LGQ6UXG3 332 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SFR1Q86XK3 245 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RNF135Q8IUD6 432 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 IQUBQ8NA54 791 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KCNG4Q8TDN1 519 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HASPINQ8TF76 798 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TSPAN18Q96SJ8 248 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CUEDC2Q9H467 287 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PLEKHA4Q9H4M7 779 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MRPL44Q9H9J2 332 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RPF1Q9H9Y2 349 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GOLGA2P5Q9HBQ8 144 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RCOR1Q9UKL0 485 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PCDHA7Q9UN72 937 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 NR2E1Q9Y466 385 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SCN1AP35498 2009 aa10.61□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CCDC195A0A1B0GUA6 201 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TTC26A0AVF1 554 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 LACTBL1A8MY62 500 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ANKRD63C9JTQ0 380 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PODXLO00592 558 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DPYSL4O14531 572 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MEFVO15553 781 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DCXO43602 365 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GPR37L1O60883 481 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ADRB2P07550 413 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SPATA31D3P0C874 917 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 IDEP14735 1019 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RPL17P18621 184 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ME1P48163 572 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SOX4Q06945 474 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 POSTNQ15063 836 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 E2F4Q16254 413 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PSMD5Q16401 504 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 AXDND1Q5T1B0 1012 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SHC4Q6S5L8 630 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PRSS55Q6UWB4 352 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TMC5Q6UXY8 1006 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 SPATA31D4Q6ZUB0 917 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GPR149Q86SP6 731 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MAP4K3Q8IVH8 894 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CD302Q8IX05 232 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CMASQ8NFW8 434 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PIK3R5Q8WYR1 880 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 C18orf25Q96B23 403 aaPredicted RBP10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 HVCN1Q96D96 273 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 CLSTN3Q9BQT9 956 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MSTO1Q9BUK6 570 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 STRA6Q9BX79 667 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TNMDQ9H2S6 317 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 MAN1C1Q9NR34 630 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 KBTBD4Q9NVX7 518 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 EXOC7Q9UPT5 735 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 STYXL1Q9Y6J8 313 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DOCK8Q8NF50 2099 aa10.6□□□□□ -0.71
TNFRSF1A-214ENST00000543048 DENND4AQ7Z401 1863 aa10.59□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FRMD3A2A2Y4 597 aa10.59□□□□□ -0.71
TNFRSF1A-214ENST00000543048 POLR2DO15514 142 aaKnown RBP10.59□□□□□ -0.71
TNFRSF1A-214ENST00000543048 TGM5O43548 720 aa10.59□□□□□ -0.71
TNFRSF1A-214ENST00000543048 FAM189A1O60320 539 aa10.59□□□□□ -0.71
TNFRSF1A-214ENST00000543048 WEE2P0C1S8 567 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 472 ms