RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SMC2O95347 1197 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 LDHAP00338 332 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 CD44P16070 742 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 LRPAP1P30533 357 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 SNRPFP62306 86 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 POU5F1Q01860 360 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 SMC1AQ14683 1233 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 SKIV2LQ15477 1246 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 RTP2Q5QGT7 225 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 ZNF658Q5TYW1 1059 aaPredicted RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 LMBRD2Q68DH5 695 aaPredicted RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 HS2ST1Q7LGA3 356 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 CD302Q8IX05 232 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 GUF1Q8N442 669 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 UROC1Q96N76 676 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 GBP4Q96PP9 640 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 ASB7Q9H672 318 aa19.4■□□□□ 0.7
DDX55-204ENST00000536079 NGRNQ9NPE2 291 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 UBQLN1Q9UMX0 589 aaKnown RBP19.4■□□□□ 0.7
DDX55-204ENST00000536079 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 PDXKO00764 312 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 NR3C1P04150 777 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 CYP3A5P20815 502 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 CA8P35219 290 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 LTBRP36941 435 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 CASP4P49662 377 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 PMS1P54277 932 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 DSG1Q02413 1049 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 DLX2Q07687 328 aaPredicted RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 COL19A1Q14993 1142 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 SNRNP35Q16560 246 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 DUSP6Q16828 381 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 ZCWPW2Q504Y3 356 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 FAM171A1Q5VUB5 890 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 PDE12Q6L8Q7 609 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 XXYLT1Q8NBI6 393 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 DDX27Q96GQ7 796 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 POP1Q99575 1024 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 TLE6Q9H808 572 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 RMND1Q9NWS8 449 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 HOOK1Q9UJC3 728 aaKnown RBP19.39■□□□□ 0.69
DDX55-204ENST00000536079 TRAF3IP3Q9Y228 551 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 DERAQ9Y315 318 aa19.39■□□□□ 0.69
DDX55-204ENST00000536079 ZNF233A6NK53 670 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 KIAA0391O15091 583 aaKnown RBP19.38■□□□□ 0.69
DDX55-204ENST00000536079 SPTLC1O15269 473 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CLASP2O75122 1294 aaKnown RBP19.38■□□□□ 0.69
DDX55-204ENST00000536079 IL18RAPO95256 599 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 GLP2RO95838 553 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 RPL9P32969 192 aaKnown RBP19.38■□□□□ 0.69
DDX55-204ENST00000536079 TFF2Q03403 129 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CYP24A1Q07973 514 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 MORC3Q14149 939 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CTC1Q2NKJ3 1217 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 PRSS55Q6UWB4 352 aaPredicted RBP19.38■□□□□ 0.69
DDX55-204ENST00000536079 ADSSL1Q8N142 457 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 OR5B17Q8NGF7 314 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CXorf38Q8TB03 319 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CLSTN2Q9H4D0 955 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 CGNQ9P2M7 1197 aaKnown RBP19.38■□□□□ 0.69
DDX55-204ENST00000536079 C2CD2Q9Y426 696 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 IRAK3Q9Y616 596 aa19.38■□□□□ 0.69
DDX55-204ENST00000536079 SF3B1O75533 1304 aaKnown RBP eCLIP19.37■□□□□ 0.693e-6■■■■■ 88.4
DDX55-204ENST00000536079 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 ANO9A1A5B4 782 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 EXOC3O60645 756 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 CNPP09543 421 aaKnown RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 RPL17P18621 184 aaKnown RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 TKTP29401 623 aaKnown RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 GLUD2P49448 558 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 TFAMQ00059 246 aaKnown RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 ADAM15Q13444 863 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 KCNC3Q14003 757 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 COBLL1Q53SF7 1204 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 C9orf57Q5W0N0 161 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 CEP57Q86XR8 500 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 SLC9A9Q8IVB4 645 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 C1orf127Q8N9H9 656 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 BEST2Q8NFU1 509 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 FEZF2Q8TBJ5 459 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 TMEM174Q8WUU8 243 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 RIN2Q8WYP3 895 aaPredicted RBP19.37■□□□□ 0.69
DDX55-204ENST00000536079 EEF2KMTQ96G04 330 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 MFSD14AQ96MC6 490 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 KLHL5Q96PQ7 755 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 DPP3Q9NY33 737 aa19.37■□□□□ 0.69
DDX55-204ENST00000536079 PPP1R3GB7ZBB8 358 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 PIRO00625 290 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 ADAM12O43184 909 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 TBX10O75333 385 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 FGFR3P22607 806 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 USP41Q3LFD5 358 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 LLGL2Q6P1M3 1020 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
DDX55-204ENST00000536079 GOLGA5Q8TBA6 731 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 LNX1Q8TBB1 728 aaPredicted RBP19.36■□□□□ 0.69
DDX55-204ENST00000536079 ZNF516Q92618 1163 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 CCDC127Q96BQ5 260 aa19.36■□□□□ 0.69
DDX55-204ENST00000536079 TSPAN18Q96SJ8 248 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms