RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	ALDH1A3	P47895	512 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	FLT3LG	P49771	235 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	ARFIP2	P53365	341 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	SUMO3	P55854	103 aa	Predicted RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	MFSD14B	Q5SR56	506 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	DACT2	Q5SW24	774 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	EMC10	Q5UCC4	262 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	AFMID	Q63HM1	303 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	OTUD7B	Q6GQQ9	843 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	ATG14	Q6ZNE5	492 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	SESTD1	Q86VW0	696 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	MYLK4	Q86YV6	388 aa	Predicted RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	PLXDC1	Q8IUK5	500 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	IL17RD	Q8NFM7	739 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	ADAMTS17	Q8TE56	1095 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	DACT3	Q96B18	629 aa	Predicted RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	CEP95	Q96GE4	821 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	LCOR	Q96JN0	433 aa	Predicted RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	MSLNL	Q96KJ4	702 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	GPHA2	Q96T91	129 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	C1orf43	Q9BWL3	253 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	WDR12	Q9GZL7	423 aa	Known RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	KCNH6	Q9H252	994 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	ARFGAP3	Q9NP61	516 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	GNL3L	Q9NVN8	582 aa	Known RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	PADI4	Q9UM07	663 aa		4.85	□□□□□ -1.63
RDX-208	ENST00000530085	SMG5	Q9UPR3	1016 aa	Known RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085	RUVBL1	Q9Y265	456 aa	Known RBP	4.85	□□□□□ -1.63
RDX-208	ENST00000530085		A0A1B0GTL3	188 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	PMS2P1	A4D2B8	440 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	POM121B	A6NF01	834 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	NPIPB6	E9PJ23	425 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085		F8W8V4	182 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	GRM6	O15303	877 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	NCK2	O43639	380 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	FOXD2	O60548	495 aa	Predicted RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	AHSG	P02765	367 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	CD1A	P06126	327 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	SBK3	P0C264	359 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	PIK3CG	P48736	1102 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	GZMK	P49863	264 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	CREM	Q03060	361 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	MRPL49	Q13405	166 aa	Known RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	DAG1	Q14118	895 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	ATP2B3	Q16720	1220 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	RNF151	Q2KHN1	245 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	PABPC1L	Q4VXU2	614 aa	Known RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	ZNF385B	Q569K4	471 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	CIAPIN1	Q6FI81	312 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	FRMD5	Q7Z6J6	570 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	RALYL	Q86SE5	291 aa	Known RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	ADGRE4P	Q86SQ3	457 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	RNF152	Q8N8N0	203 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	POF1B	Q8WVV4	589 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	KBTBD7	Q8WVZ9	684 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	BRI3BP	Q8WY22	251 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	RABGGTA	Q92696	567 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	TNPO1	Q92973	898 aa	Known RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	ZC3H10	Q96K80	434 aa	Known RBP	4.84	□□□□□ -1.63
RDX-208	ENST00000530085	MYOC	Q99972	504 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	HERPUD2	Q9BSE4	406 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	TRIM54	Q9BYV2	358 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	VPS11	Q9H270	941 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	CERS4	Q9HA82	394 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	PNPLA8	Q9NP80	782 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	NCDN	Q9UBB6	729 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	SLC23A1	Q9UHI7	598 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	ZDHHC8	Q9ULC8	765 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	LRCH1	Q9Y2L9	728 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085	NR2E1	Q9Y466	385 aa		4.84	□□□□□ -1.63
RDX-208	ENST00000530085		A0A0G2JLL6	359 aa	Predicted RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	TCAF2	A6NFQ2	919 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	PRSS29P	A6NIE9	313 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	FGF18	O76093	207 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	MATN4	O95460	622 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	RAP2A	P10114	183 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	MTHFD1	P11586	935 aa	Known RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	TSHR	P16473	764 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	ABCB4	P21439	1286 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	HAL	P42357	657 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	NPEPPS	P55786	919 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	SOX8	P57073	446 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	PTH1R	Q03431	593 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	CCDC93	Q567U6	631 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	ANO1	Q5XXA6	986 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	SEM1	Q6ZVN7	128 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	ZNF761	Q86XN6	746 aa	Predicted RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	KBTBD2	Q8IY47	623 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	CFHR4	Q92496	578 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	KIAA1191	Q96A73	305 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	EVI5L	Q96CN4	794 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	NMD3	Q96D46	503 aa	Known RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	P2RX7	Q99572	595 aa	Known RBP	4.83	□□□□□ -1.64
RDX-208	ENST00000530085	MRI1	Q9BV20	369 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	COLEC11	Q9BWP8	271 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	DPH1	Q9BZG8	443 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	IL23A	Q9NPF7	189 aa		4.83	□□□□□ -1.64
RDX-208	ENST00000530085	STK32B	Q9NY57	414 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms