RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 GLRA4Q5JXX5 417 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 CDCA2Q69YH5 1023 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 HEATR6Q6AI08 1181 aaKnown RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 SLC8B1Q6J4K2 584 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 ANKS3Q6ZW76 656 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 SMARCD2Q92925 531 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 C2orf42Q9NWW7 574 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 USP20Q9Y2K6 914 aa17.24■□□□□ 0.35
HDAC6-236ENST00000498808 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
HDAC6-236ENST00000498808 FRYQ5TBA9 3013 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 CEP295Q9C0D2 2601 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 A0A087WWV3 80 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 PRRG1O14668 218 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 N4BP3O15049 544 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 MOSPD3O75425 235 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 MICAL2O94851 1124 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 SEC24AO95486 1093 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 EDN1P05305 212 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 HSPA4P34932 840 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 SF3A2Q15428 464 aaKnown RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 EEF1DP3Q658K8 133 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 Q6ZS52 159 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 PDZD4Q76G19 769 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 MAEAQ7L5Y9 396 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 PIGOQ8TEQ8 1089 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 DEPDC1BQ8WUY9 529 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 PPP1R10Q96QC0 940 aaKnown RBP17.23■□□□□ 0.35
HDAC6-236ENST00000498808 GOLGA2P5Q9HBQ8 144 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 RXFP3Q9NSD7 469 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
HDAC6-236ENST00000498808 ZNF197O14709 1029 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 ELF1P32519 619 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 UPP1Q16831 310 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 AASDHQ4L235 1098 aaPredicted RBP17.22■□□□□ 0.35
HDAC6-236ENST00000498808 EARS2Q5JPH6 523 aaKnown RBP17.22■□□□□ 0.35
HDAC6-236ENST00000498808 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 SLFN12Q8IYM2 578 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 HS6ST3Q8IZP7 471 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 INSL5Q9Y5Q6 135 aa17.22■□□□□ 0.35
HDAC6-236ENST00000498808 SPAG17Q6Q759 2223 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 CPLX1O14810 134 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 ZNF263O14978 683 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 ATF2P15336 505 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 GJA1P17302 382 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 IRX6P78412 446 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-236ENST00000498808 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
HDAC6-236ENST00000498808 CCDC6Q16204 474 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 CEP68Q76N32 757 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 MFSD6LQ8IWD5 586 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 ZBTB8OSQ8IWT0 167 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
HDAC6-236ENST00000498808 NAP1L4Q99733 375 aaKnown RBP17.21■□□□□ 0.35
HDAC6-236ENST00000498808 TRPV4Q9HBA0 871 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 CYP4F11Q9HBI6 524 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 GJB4Q9NTQ9 266 aa17.21■□□□□ 0.35
HDAC6-236ENST00000498808 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 TRAPPC3O43617 180 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 CDC45O75419 566 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
HDAC6-236ENST00000498808 PRKCBP05771 671 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 PROS1P07225 676 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 HOXB3P14651 431 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-236ENST00000498808 SOX9P48436 509 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 MLLT6P55198 1093 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-236ENST00000498808 ARPP19P56211 112 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 LRRC32Q14392 662 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 TMEM132AQ24JP5 1023 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 CYP4A22Q5TCH4 519 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
HDAC6-236ENST00000498808 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 UROC1Q96N76 676 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 CCDC113Q9H0I3 377 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 ARRDC1-AS1Q9H2J1 176 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 CEP72Q9P209 647 aa17.2■□□□□ 0.34
HDAC6-236ENST00000498808 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 HEPACAM2A8MVW5 462 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 AXIN1O15169 862 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 EPHA5P54756 1037 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 SOX4Q06945 474 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-236ENST00000498808 MAPK6Q16659 721 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 TXNDC11Q6PKC3 985 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 WDR5BQ86VZ2 330 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 C12orf50Q8NA57 414 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-236ENST00000498808 MSANTD3Q96H12 275 aa17.19■□□□□ 0.34
HDAC6-236ENST00000498808 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
HDAC6-236ENST00000498808 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-236ENST00000498808 ZFYVE26Q68DK2 2539 aa17.18■□□□□ 0.34
HDAC6-236ENST00000498808 ACKR2O00590 384 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms