RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 MAN1B1Q9UKM7 699 aa14.74□□□□□ -0.05
FDPS-219ENST00000495308 SF3B1O75533 1304 aaKnown RBP eCLIP14.73□□□□□ -0.055e-7■■■■■ 28.6
FDPS-219ENST00000495308 C2orf71A6NGG8 1288 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 TMEM189-UBE2V1I3L0A0 370 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 I3L4J1 428 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 BIN1O00499 593 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 PDXKO00764 312 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 PPEF2O14830 753 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 LINC01565O15544 149 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 XPOTO43592 962 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 KIF20AO95235 890 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 CXCL14O95715 111 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 PRCPP42785 496 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 BRCC3P46736 316 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 GLUD2P49448 558 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 SNRPFP62306 86 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 PTPN14Q15678 1187 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 SNRNP35Q16560 246 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 LMBRD2Q68DH5 695 aaPredicted RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 PDE12Q6L8Q7 609 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 DCLRE1AQ6PJP8 1040 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 C12orf56Q8IXR9 622 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 MRPL43Q8N983 215 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 XXYLT1Q8NBI6 393 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 BEST2Q8NFU1 509 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 GOLGA5Q8TBA6 731 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 TLE6Q9H808 572 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 PDE11AQ9HCR9 933 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 CGNQ9P2M7 1197 aaKnown RBP14.73□□□□□ -0.05
FDPS-219ENST00000495308 DERAQ9Y315 318 aa14.73□□□□□ -0.05
FDPS-219ENST00000495308 PTPRJQ12913 1337 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 ZNF233A6NK53 670 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 EXOC3O60645 756 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 NR3C1P04150 777 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 URODP06132 367 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 CYP3A5P20815 502 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 LRPAP1P30533 357 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 RPL9P32969 192 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 RBM10P98175 930 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 TFAMQ00059 246 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 USP41Q3LFD5 358 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 RTP2Q5QGT7 225 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 FAM171A1Q5VUB5 890 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 EP400NLQ6ZTU2 488 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 GPT2Q8TD30 523 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 PPP2R3CQ969Q6 453 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 DDX27Q96GQ7 796 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 CLDND1Q9NY35 253 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 STK39Q9UEW8 545 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 C2CD2Q9Y426 696 aa14.72□□□□□ -0.05
FDPS-219ENST00000495308 MTCL1Q9Y4B5 1905 aaKnown RBP14.72□□□□□ -0.05
FDPS-219ENST00000495308 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 BMP6P22004 513 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 TKTP29401 623 aaKnown RBP14.71□□□□□ -0.05
FDPS-219ENST00000495308 CASP4P49662 377 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 CYP24A1Q07973 514 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 BMS1Q14692 1282 aaKnown RBP14.71□□□□□ -0.05
FDPS-219ENST00000495308 DUSP6Q16828 381 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 KIAA0319Q5VV43 1072 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 KIAA1841Q6NSI8 718 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 LLGL2Q6P1M3 1020 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 PRSS55Q6UWB4 352 aaPredicted RBP14.71□□□□□ -0.05
FDPS-219ENST00000495308 CEP57Q86XR8 500 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 RIN2Q8WYP3 895 aaPredicted RBP14.71□□□□□ -0.05
FDPS-219ENST00000495308 TSPAN18Q96SJ8 248 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 CLSTN2Q9H4D0 955 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 KIAA1586Q9HCI6 787 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 MRPL17Q9NRX2 175 aaKnown RBP14.71□□□□□ -0.05
FDPS-219ENST00000495308 CHST7Q9NS84 486 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 DMAC2Q9NW81 257 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 DPP3Q9NY33 737 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 TRAF3IP3Q9Y228 551 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 NUB1Q9Y5A7 615 aa14.71□□□□□ -0.05
FDPS-219ENST00000495308 LILRB3O75022 631 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 CLASP2O75122 1294 aaKnown RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 GLP2RO95838 553 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 DLATP10515 647 aaKnown RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 RPL17P18621 184 aaKnown RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 NR2F2P24468 414 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 MCM4P33991 863 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 DSG1Q02413 1049 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 TFF2Q03403 129 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 DLX2Q07687 328 aaPredicted RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 ELAVL2Q12926 359 aaKnown RBP14.7□□□□□ -0.06
FDPS-219ENST00000495308 MORC3Q14149 939 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 ZCWPW2Q504Y3 356 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 COBLL1Q53SF7 1204 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 C9orf57Q5W0N0 161 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 SCARA3Q6AZY7 606 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 SLC9A9Q8IVB4 645 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 GLYCTKQ8IVS8 523 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 ADSSL1Q8N142 457 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 EFHBQ8N7U6 833 aa14.7□□□□□ -0.06
FDPS-219ENST00000495308 VN1R2Q8NFZ6 395 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms