RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ENOX1Q8TC92 643 aaKnown RBP20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 PLEKHO2Q8TD55 490 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 CCDC127Q96BQ5 260 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 EEF2KMTQ96G04 330 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 IGSF21Q96ID5 467 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 PAAF1Q9BRP4 392 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 C11orf84Q9BUA3 381 aaPredicted RBP20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 TTYH1Q9H313 450 aaPredicted RBP20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 GOLGA2P5Q9HBQ8 144 aa20.97■□□□□ 0.95
PCOLCE-208ENST00000487172 LRRIQ3A6PVS8 624 aaPredicted RBP20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 NT5C1B-RDH14C9J2C7 533 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 DLATP10515 647 aaKnown RBP20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 TNNI1P19237 187 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 CLCNKBP51801 687 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 VAMP7P51809 220 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 MARSP56192 900 aaKnown RBP20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 TFAMQ00059 246 aaKnown RBP20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 ZNF697Q5TEC3 545 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 C11orf57Q6ZUT1 292 aaPredicted RBP20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 KLHL23Q8NBE8 558 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 FBXO22Q8NEZ5 403 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 ANKRD36BP1Q96IX9 119 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 MARCH5Q9NX47 278 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 DPP3Q9NY33 737 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 MTUS1Q9ULD2 1270 aa20.96■□□□□ 0.95
PCOLCE-208ENST00000487172 ANO9A1A5B4 782 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 PODXLO00592 558 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 PIRO00625 290 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 FGF18O76093 207 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 TMEM191BP0C7N4 346 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 PBX3P40426 434 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 UBE3AQ05086 875 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 OR5B17Q8NGF7 314 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 ARNTL2Q8WYA1 636 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 ZNF516Q92618 1163 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 TMEM169Q96HH4 297 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 POP1Q99575 1024 aaKnown RBP20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 BPIFA3Q9BQP9 254 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 NAT10Q9H0A0 1025 aaKnown RBP20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 DNAJC25Q9H1X3 360 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 CERS4Q9HA82 394 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 STK39Q9UEW8 545 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 ARMCX3Q9UH62 379 aaPredicted RBP20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 LZTS1Q9Y250 596 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 PRG3Q9Y2Y8 225 aaPredicted RBP20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 PTPRJQ12913 1337 aa20.95■□□□□ 0.94
PCOLCE-208ENST00000487172 EFEMP2O95967 443 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 TNNC2P02585 160 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 ITGB1P05556 798 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 PAX3P23760 479 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 FXR1P51114 621 aaKnown RBP eCLIP20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 DLG4P78352 724 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 KRT17Q04695 432 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 GPM6BQ13491 265 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 TPD52L1Q16890 204 aaPredicted RBP20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 ANO6Q4KMQ2 910 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 C1orf220Q5T0J3 134 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 C9orf57Q5W0N0 161 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 CD300LGQ6UXG3 332 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 TMEM173Q86WV6 379 aaPredicted RBP20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 C1orf127Q8N9H9 656 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 CXorf38Q8TB03 319 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 SPPL3Q8TCT6 385 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 CACNG4Q9UBN1 327 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 ADAM28Q9UKQ2 775 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 ITGA11Q9UKX5 1188 aa20.94■□□□□ 0.94
PCOLCE-208ENST00000487172 TADA2AO75478 443 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 B3GAT3O94766 335 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 C4BPAP04003 597 aaKnown RBP20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 GUCY2FP51841 1108 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 LMBRD2Q68DH5 695 aaPredicted RBP20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 TRAPPC11Q7Z392 1133 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 DDX53Q86TM3 631 aaKnown RBP20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 BCL7CQ8WUZ0 217 aaPredicted RBP20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 RABGGTAQ92696 567 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 MTMR12Q9C0I1 747 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 LMAN2LQ9H0V9 348 aa20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 PUF60Q9UHX1 559 aaKnown RBP20.93■□□□□ 0.94
PCOLCE-208ENST00000487172 EPOPA6NHQ4 379 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 TULP1O00294 542 aaPredicted RBP20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 KIF4AO95239 1232 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 CAVIN2O95810 425 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 GTF2H1P32780 548 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 CCDC40Q4G0X9 1142 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 C15orf39Q6ZRI6 1047 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 IRF2BP1Q8IU81 584 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 FAM114A1Q8IWE2 563 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 RNF168Q8IYW5 571 aaPredicted RBP20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 C3orf58Q8NDZ4 430 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 PLXNA4Q9HCM2 1894 aa20.92■□□□□ 0.94
PCOLCE-208ENST00000487172 F8W810 466 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 TRAPPC3O43617 180 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 STX10O60499 249 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 LPXNO60711 386 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 ITGB3P05106 788 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 RBP5P82980 135 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 MYL5Q02045 173 aa20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 ELAVL2Q12926 359 aaKnown RBP20.91■□□□□ 0.94
PCOLCE-208ENST00000487172 GRIN2CQ14957 1233 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms