RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 MFSD14AQ96MC6 490 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 EIF2AQ9BY44 585 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 MRPL9Q9BYD2 267 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 WNT8AQ9H1J5 351 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 NDST4Q9H3R1 872 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 NXF3Q9H4D5 531 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 ELAC1Q9H777 363 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 PTPRHQ9HD43 1115 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TMEM161AQ9NX61 479 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 TAB2Q9NYJ8 693 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 LIMA1Q9UHB6 759 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 CPSF3Q9UKF6 684 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
UBR4-214ENST00000486515 INPP5FQ9Y2H2 1132 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 DERAQ9Y315 318 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 REV3LO60673 3130 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 ZNF292O60281 2723 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 UMODL1Q5DID0 1318 aa7.52□□□□□ -1.21
UBR4-214ENST00000486515 ARHGEF37A1IGU5 675 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 TTLL13PA6NNM8 815 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 LACTBL1A8MY62 500 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 ENPP3O14638 875 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 P4HA2O15460 535 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 ZNF623O75123 536 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 RECQL4O94761 1208 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 UPP2O95045 317 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 CXCL10P02778 98 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 PTMAP06454 111 aaKnown RBP7.51□□□□□ -1.21
UBR4-214ENST00000486515 THP07101 528 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 PNPLA4P41247 253 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 PIK3CAP42336 1068 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 CASP4P49662 377 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 COPB1P53618 953 aaKnown RBP7.51□□□□□ -1.21
UBR4-214ENST00000486515 KCNH2Q12809 1159 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 MYO1EQ12965 1108 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 TRIM14Q14142 442 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 KRT31Q15323 416 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 EXOC3L4Q17RC7 722 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 SLC39A4Q6P5W5 647 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 GBP6Q6ZN66 633 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 LRRC55Q6ZSA7 311 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 HFE2Q6ZVN8 426 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 CACNA2D4Q7Z3S7 1137 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 GAS2L3Q86XJ1 694 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 FMNL3Q8IVF7 1028 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 ZC3H3Q8IXZ2 948 aaKnown RBP7.51□□□□□ -1.21
UBR4-214ENST00000486515 PARD3BQ8TEW8 1205 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 HERVK_113Q902F9 699 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 IQCDQ96DY2 449 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 FAM81BQ96LP2 452 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 CGRRF1Q99675 332 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 IKZF4Q9H2S9 585 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 TMEM8AQ9HCN3 771 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 PDE11AQ9HCR9 933 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 FAM86C1Q9NVL1 165 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 IFNKQ9P0W0 207 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 C2CD2Q9Y426 696 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBR4-214ENST00000486515 SLC4A7Q9Y6M7 1214 aa7.51□□□□□ -1.21
UBR4-214ENST00000486515 DNAH12Q6ZR08 3092 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ARL5CA6NH57 179 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 LGALS16A8MUM7 142 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 C9IYK1 514 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 TRIM49P0CI25 452 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 TRIM49CP0CI26 452 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ACRP10323 421 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ZNF18P17022 549 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 PAX3P23760 479 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 MLH1P40692 756 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 TNFSF9P41273 254 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 GCLMP48507 274 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 YWHAEP62258 255 aaKnown RBP7.5□□□□□ -1.21
UBR4-214ENST00000486515 RBP5P82980 135 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 GRIK3Q13003 919 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 DSC3Q14574 896 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 NCAPHQ15003 741 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ENOX2Q16206 610 aaKnown RBP7.5□□□□□ -1.21
UBR4-214ENST00000486515 SGSM1Q2NKQ1 1148 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 NOMO2Q5JPE7 1267 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 JADE1Q6IE81 842 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 SARM1Q6SZW1 724 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 OTOP2Q7RTS6 562 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 MRPL10Q7Z7H8 261 aaKnown RBP7.5□□□□□ -1.21
UBR4-214ENST00000486515 TRIM59Q8IWR1 403 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 GJD3Q8N144 294 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 CEP120Q8N960 986 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 FBXL13Q8NEE6 735 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 NEK11Q8NG66 645 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 DDX27Q96GQ7 796 aaKnown RBP7.5□□□□□ -1.21
UBR4-214ENST00000486515 PKNOX2Q96KN3 472 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 ZNF560Q96MR9 790 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 UROC1Q96N76 676 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 YME1L1Q96TA2 773 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 NUP58Q9BVL2 599 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 TMX1Q9H3N1 280 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 AAASQ9NRG9 546 aa7.5□□□□□ -1.21
UBR4-214ENST00000486515 DPP3Q9NY33 737 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms