RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TMEM130Q8N3G9 435 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ING5Q8WYH8 240 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 MCRS1Q96EZ8 462 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ARHGEF3Q9NR81 526 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 SLC2A4RGQ9NR83 387 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 MRPS23Q9Y3D9 190 aaKnown RBP14.52□□□□□ -0.09
CPSF4-210ENST00000469897 SIT1Q9Y3P8 196 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 ARID2Q68CP9 1835 aa14.52□□□□□ -0.09
CPSF4-210ENST00000469897 PIEZO1Q92508 2521 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 WDR27A2RRH5 827 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 TBC1D4O60343 1298 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 SEC24AO95486 1093 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 PTPN2P17706 415 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 MRPL58Q14197 206 aaKnown RBP14.51□□□□□ -0.09
CPSF4-210ENST00000469897 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
CPSF4-210ENST00000469897 ARL6IP4Q66PJ3 421 aaKnown RBP14.51□□□□□ -0.09
CPSF4-210ENST00000469897 PHLDB3Q6NSJ2 640 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 POTEHQ6S545 545 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 RTL10Q7L3V2 364 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 NKD2Q969F2 451 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-210ENST00000469897 HAPLN2Q9GZV7 340 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 CYP4F11Q9HBI6 524 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 SMC3Q9UQE7 1217 aa14.51□□□□□ -0.09
CPSF4-210ENST00000469897 PRR23AA6NEV1 266 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 H7C4K7 107 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 PRRG1O14668 218 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 SYN3O14994 580 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 LRG1P02750 347 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 RHOP08100 348 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 POU2F2P09086 479 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 MCL1Q07820 350 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 CTXN3Q4LDR2 81 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 TMEM119Q4V9L6 283 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 SLC44A4Q53GD3 710 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 ZPBP2Q6X784 338 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 MTSS1LQ765P7 747 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 HAUS6Q7Z4H7 955 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 NPAS3Q8IXF0 933 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 TBC1D32Q96NH3 1257 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 KXD1Q9BQD3 176 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 FOXQ1Q9C009 403 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 KCND2Q9NZV8 630 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 LARSQ9P2J5 1176 aaKnown RBP14.5□□□□□ -0.09
CPSF4-210ENST00000469897 TUBGCP4Q9UGJ1 667 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 FBXL5Q9UKA1 691 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 KCNH3Q9ULD8 1083 aa14.5□□□□□ -0.09
CPSF4-210ENST00000469897 ARHGEF37A1IGU5 675 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 LRRN2O75325 713 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 CLTAP09496 248 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 ATF2P15336 505 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 MARCKSP29966 332 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-210ENST00000469897 MCM4P33991 863 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 UBA7P41226 1012 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 TNFSF9P41273 254 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 STARD6P59095 220 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 GRIN1Q05586 938 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 NOLC1Q14978 699 aaKnown RBP eCLIP14.49□□□□□ -0.09
CPSF4-210ENST00000469897 SLC5A9Q2M3M2 681 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 TCEAL8Q8IYN2 117 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 LRRC15Q8TF66 581 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 DDX12PQ92771 950 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 BICD1Q96G01 975 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 CALML4Q96GE6 196 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 SHDQ96IW2 340 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 SUSD3Q96L08 255 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 AK8Q96MA6 479 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 CORO1BQ9BR76 489 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 PLA2G2FQ9BZM2 168 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
CPSF4-210ENST00000469897 DLGAP2Q9P1A6 1054 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 TIMM13Q9Y5L4 95 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-210ENST00000469897 ZDBF2Q9HCK1 2354 aa14.49□□□□□ -0.09
CPSF4-210ENST00000469897 LACTBL1A8MY62 500 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 CXCL8P10145 99 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 GLULP15104 373 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 CD72P21854 359 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 MCM2P49736 904 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 NCKAP1LP55160 1127 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 MCM6Q14566 821 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 TANGO2Q6ICL3 276 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 GPBP1Q86WP2 473 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 APPL2Q8NEU8 664 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 TCEAL4Q96EI5 215 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 REEP2Q9BRK0 252 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 ZHX3Q9H4I2 956 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 PLEKHA5Q9HAU0 1116 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 TBX20Q9UMR3 447 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 MTF2Q9Y483 593 aaPredicted RBP14.48□□□□□ -0.09
CPSF4-210ENST00000469897 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
CPSF4-210ENST00000469897 KMT2EQ8IZD2 1858 aa14.48□□□□□ -0.09
CPSF4-210ENST00000469897 PLXNA3P51805 1871 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 TTC26A0AVF1 554 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 H0YCG3 227 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 CEBPBP17676 345 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 LIG4P49917 911 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 ADCY1Q08828 1119 aa14.47□□□□□ -0.09
CPSF4-210ENST00000469897 ZBTB6Q15916 424 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 715.7 ms