RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CAPN8A6NHC0 703 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 GRXCR1A8MXD5 290 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 MYO1FO00160 1098 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 APAF1O14727 1248 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 GRM6O15303 877 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 MATN4O95460 622 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 KRT18P05783 430 aaKnown RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 MYBP10242 640 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 MTHFD1P11586 935 aaKnown RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 MAGEA10P43363 369 aaPredicted RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM193AP78312 1265 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 PTH1RQ03431 593 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 UBXN2BQ14CS0 331 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 LLGL1Q15334 1064 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 CNN3Q15417 329 aaKnown RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 DCAF17Q5H9S7 520 aaPredicted RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 UBXN11Q5T124 520 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 RNF220Q5VTB9 566 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 APOA5Q6Q788 366 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 GADL1Q6ZQY3 521 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 POLNQ7Z5Q5 900 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 C11orf96Q7Z7L8 435 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 DAAM2Q86T65 1068 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM83AQ86UY5 434 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 PPP1R3BQ86XI6 285 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 COL23A1Q86Y22 540 aaPredicted RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 ZFPM1Q8IX07 1006 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 CCDC146Q8IYE0 955 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 CAMKK1Q8N5S9 505 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 FAM156AQ8NDB6 213 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 FBXO18Q8NFZ0 1043 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 IL31RAQ8NI17 732 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 Q8TCH9 128 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 ST8SIA2Q92186 375 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 EDAQ92838 391 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 UHRF1Q96T88 793 aaPredicted RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 C1QTNF3Q9BXJ4 246 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 NAA15Q9BXJ9 866 aaKnown RBP2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 C22orf23Q9BZE7 217 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 DPH1Q9BZG8 443 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 RLIMQ9NVW2 624 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 JKAMPQ9P055 326 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 NCDNQ9UBB6 729 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 ABCF2Q9UG63 623 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 ZDHHC8Q9ULC8 765 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 CLCA2Q9UQC9 943 aa2.44□□□□□ -2.02
NUCKS1-202ENST00000464938 KLRG2A4D1S0 409 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 DRGXA6NNA5 263 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ISM1B1AKI9 464 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 GOLIM4O00461 696 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 PHGDHO43175 533 aaKnown RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF623O75123 536 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 POMCP01189 267 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 AMHP03971 560 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SLPIP03973 132 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ANXA1P04083 346 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 CD1AP06126 327 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 MYF5P13349 255 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ATP5JP18859 108 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SMARCA1P28370 1054 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 MSX2P35548 267 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 TM4SF4P48230 202 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ALDH5A1P51649 535 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 CACNB3P54284 484 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ICAM4Q14773 271 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 KIF22Q14807 665 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 R3HDM1Q15032 1099 aaKnown RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 POLD3Q15054 466 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SAFBQ15424 915 aaKnown RBP eCLIP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 VPS72Q15906 364 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 COBLL1Q53SF7 1204 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 DARS2Q6PI48 645 aaKnown RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF365Q70YC5 407 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 CIR1Q86X95 450 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 PDSS2Q86YH6 399 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SYT12Q8IV01 421 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 CCAR1Q8IX12 1150 aaKnown RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 TTC9BQ8N6N2 239 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 GIMAP8Q8ND71 665 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 NLGN4YQ8NFZ3 816 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ZFP28Q8NHY6 868 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 KBTBD7Q8WVZ9 684 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ARL8AQ96BM9 186 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 MIEF2Q96C03 454 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SLC35A4Q96G79 324 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 APIPQ96GX9 242 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 TMEM176AQ96HP8 235 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 NT5C1BQ96P26 610 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 SCAND2PQ9GZW5 306 aaPredicted RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 BTBD1Q9H0C5 482 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ZMAT3Q9HA38 289 aaKnown RBP2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 GPR35Q9HC97 309 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 FBXO34Q9NWN3 711 aa2.43□□□□□ -2.02
NUCKS1-202ENST00000464938 ZNF536O15090 1300 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 XDHP47989 1333 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 TCRBV7S2A1N4TA0A589 114 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 PRR5-ARHGAP8B1AHC4 643 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 H3BUI4 141 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 K7ESM1 405 aa2.42□□□□□ -2.02
NUCKS1-202ENST00000464938 PLSCR1O15162 318 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms