RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 HVCN1Q96D96 273 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 CLSTN3Q9BQT9 956 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 MSTO1Q9BUK6 570 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 ST6GALNAC4Q9H4F1 302 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 TCHHQ07283 1943 aa11.09□□□□□ -0.63
SF3A3-204ENST00000462258 TTC26A0AVF1 554 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 TMEM221A6NGB7 291 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 M0R296 226 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 SYN3O14994 580 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 ADAM12O43184 909 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PPP6R2O75170 966 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PAPLNO95428 1278 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 C8AP07357 584 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 ZSCAN22P10073 491 aaPredicted RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PDIA4P13667 645 aaKnown RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 GAP43P17677 238 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 RPL9P32969 192 aaKnown RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 MCM4P33991 863 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 SPAG1Q07617 926 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 SIGLEC14Q08ET2 396 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 ENOX2Q16206 610 aaKnown RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 ZC2HC1CQ53FD0 456 aaPredicted RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 TRIM67Q6ZTA4 783 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 HFE2Q6ZVN8 426 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 OTOP3Q7RTS5 596 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PDILTQ8N807 584 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 STAMQ92783 540 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 DNAJC19Q96DA6 116 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PLEKHA5Q9HAU0 1116 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 SORCS3Q9UPU3 1222 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
SF3A3-204ENST00000462258 BACE2Q9Y5Z0 518 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 CDY1Q9Y6F8 540 aa11.08□□□□□ -0.64
SF3A3-204ENST00000462258 MYO10Q9HD67 2058 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 A0A0B4J269 797 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 FRMD3A2A2Y4 597 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 TISP43B9A030 160 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 XPOTO43592 962 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 ZMYND10O75800 440 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 PPP1R37O75864 691 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 GCNT3O95395 438 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 ASGR2P07307 311 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 IDEP14735 1019 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 OR1D2P34982 312 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 PKP1Q13835 747 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 RAB33AQ14088 237 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 FOXD4L6Q3SYB3 417 aaPredicted RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 PPM1LQ5SGD2 360 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 VARS2Q5ST30 1063 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 ADALQ6DHV7 355 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 FOXD4L3Q6VB84 417 aaPredicted RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 GET4Q7L5D6 327 aaPredicted RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 TMEM130Q8N3G9 435 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 SLC7A14Q8TBB6 771 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 TNMDQ9H2S6 317 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 OLFML3Q9NRN5 406 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 TBC1D7Q9P0N9 293 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 TFIP11Q9UBB9 837 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 CPSF3Q9UKF6 684 aaKnown RBP11.07□□□□□ -0.64
SF3A3-204ENST00000462258 MUC6Q6W4X9 2439 aa11.07□□□□□ -0.64
SF3A3-204ENST00000462258 DOCK6Q96HP0 2047 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 LACTBL1A8MY62 500 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 CUTAO60888 179 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 N4BP1O75113 896 aaKnown RBP11.06□□□□□ -0.64
SF3A3-204ENST00000462258 HNRNPA1P09651 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
SF3A3-204ENST00000462258 CYP3A5P20815 502 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 LRPAP1P30533 357 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 HOXA9P31269 272 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 GBP2P32456 591 aaPredicted RBP11.06□□□□□ -0.64
SF3A3-204ENST00000462258 GUCY2FP51841 1108 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 CASP5P51878 434 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 ROR1Q01973 937 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 L1TD1Q5T7N2 865 aaKnown RBP11.06□□□□□ -0.64
SF3A3-204ENST00000462258 SLC8B1Q6J4K2 584 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 ZNF280DQ6N043 979 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 RSPO2Q6UXX9 243 aaPredicted RBP11.06□□□□□ -0.64
SF3A3-204ENST00000462258 ZNF720Q7Z2F6 126 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 UBALD2Q8IYN6 164 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 KCNG4Q8TDN1 519 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 SUSD3Q96L08 255 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 SMOC2Q9H3U7 446 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
SF3A3-204ENST00000462258 WDR27A2RRH5 827 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms