RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 SNRNP35Q16560 246 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 IL31RAQ8NI17 732 aa12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.49□□□□□ -0.41
PDZRN3-203ENST00000462146 CDH16O75309 829 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 CFHP08603 1231 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 PLS3P13797 630 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 GM2AP17900 193 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 TAS2R40P59535 323 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 ATP11AP98196 1134 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 STRN3Q13033 797 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 FASTKD3Q14CZ7 662 aaKnown RBP12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 UGCGQ16739 394 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 SMNDC1O75940 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 GAS8O95995 478 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 CD58P19256 250 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 C4orf33Q8N1A6 199 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 PHTF1Q9UMS5 762 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 POC1B-GALNT4F8VUJ3 575 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 FDX1P10109 184 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 PEX19P40855 299 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 SOX10P56693 466 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 KLF1Q13351 362 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 LMBRD2Q68DH5 695 aaPredicted RBP12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 KRT39Q6A163 491 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 TRIM68Q6AZZ1 485 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 POMGNT1Q8WZA1 660 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 MAML1Q92585 1016 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
PDZRN3-203ENST00000462146 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 TCEA3O75764 348 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 ASMTLO95671 621 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 FGFR1P11362 822 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 ETS1P14921 441 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 RXRBP28702 533 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 GTF2BQ00403 316 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 P3H1Q32P28 736 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 VSIG1Q86XK7 387 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MCOLN2Q8IZK6 566 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PEX11AO75192 247 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PIAS1O75925 651 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 CBX6O95503 412 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MUTP22033 750 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MAGEA4P43358 317 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 TAF11Q15544 211 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PKN2Q16513 984 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 FBF1Q8TES7 1133 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 GRK7Q8WTQ7 553 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 MXRA8Q9BRK3 442 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 FHDC1Q9C0D6 1143 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 SAYSD1Q9NPB0 183 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 USTQ9Y2C2 406 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
PDZRN3-203ENST00000462146 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 KLRG2A4D1S0 409 aaPredicted RBP12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 H0Y3Z8 333 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 BANF1O75531 89 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 EPHB2P29323 1055 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 GCKP35557 465 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 IL9RQ01113 521 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 MOGSQ13724 837 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 ATP13A4Q4VNC1 1196 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 TRABD2AQ86V40 505 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 TTC8Q8TAM2 541 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 CSRNP1Q96S65 589 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 PLCD4Q9BRC7 762 aa12.46□□□□□ -0.41
PDZRN3-203ENST00000462146 KIAA1586Q9HCI6 787 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms