RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 PIK3R5Q8WYR1 880 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 PABPC5Q96DU9 382 aaKnown RBP11.59□□□□□ -0.55
UBR4-208ENST00000459947 KCTD10Q9H3F6 313 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
UBR4-208ENST00000459947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 GADD45BO75293 160 aaPredicted RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 CXCL14O95715 111 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 GNA14O95837 355 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 EPB41P11171 864 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 CCNE1P24864 410 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 RBP5P82980 135 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 SNRNP35Q16560 246 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 UPP1Q16831 310 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 DUOXA2Q1HG44 320 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 SMYD5Q6GMV2 418 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 MLKLQ8NB16 471 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 SUSD3Q96L08 255 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 CEP63Q96MT8 703 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 TTPALQ9BTX7 342 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 HAPLN2Q9GZV7 340 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 METTL14Q9HCE5 456 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 ALG13Q9NP73 1137 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 LMBRD1Q9NUN5 540 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 THEGQ9P2T0 379 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 BACE2Q9Y5Z0 518 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 PSMC2P35998 433 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 ACOT2P49753 483 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 NDUFV1P49821 464 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 TAF6P49848 677 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 METTL23Q86XA0 190 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 MRPL43Q8N983 215 aaKnown RBP11.58□□□□□ -0.56
UBR4-208ENST00000459947 MFSD14AQ96MC6 490 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 DPP3Q9NY33 737 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 KIAA1468Q9P260 1216 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 CASTOR2A6NHX0 329 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 B3GAT3O94766 335 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 EFEMP2O95967 443 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 ODC1P11926 461 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 CASP1P29466 404 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 MYO1EQ12965 1108 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 JADE1Q6IE81 842 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 MAN1B1Q9UKM7 699 aa11.58□□□□□ -0.56
UBR4-208ENST00000459947 GTF2H1P32780 548 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 MCM4P33991 863 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 TNFSF9P41273 254 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 CYP2J2P51589 502 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 MORC3Q14149 939 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 TMEM184AQ6ZMB5 413 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 CHST7Q9NS84 486 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 INTS13Q9NVM9 706 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 PLXNA4Q9HCM2 1894 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 TRIM21P19474 475 aaKnown RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 ATICP31939 592 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 FKBP3Q00688 224 aaKnown RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 SMARCB1Q12824 385 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 TCEAL5Q5H9L2 206 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 PLPP4Q5VZY2 271 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 ZNF280DQ6N043 979 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 CRELD2Q6UXH1 353 aaPredicted RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 ADSSL1Q8N142 457 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 NOC3LQ8WTT2 800 aaKnown RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 TAF4BQ92750 862 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 SAAL1Q96ER3 474 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 FGFBP2Q9BYJ0 223 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 RHOBTB2Q9BYZ6 727 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 STAU1O95793 577 aaKnown RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 FGFR3P22607 806 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 HOXD13P35453 343 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 KCNA1Q09470 495 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
UBR4-208ENST00000459947 PTPN14Q15678 1187 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 CENPPQ6IPU0 288 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 HLA-CQ95604 372 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 HPS3Q969F9 1004 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 PCIF1Q9H4Z3 704 aa11.57□□□□□ -0.56
UBR4-208ENST00000459947 C2orf71A6NGG8 1288 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 OR6C75A6NL08 312 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 RFXAPO00287 272 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 IKBKBO14920 756 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 KIF4AO95239 1232 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 NR2F2P24468 414 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 AARSP49588 968 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBR4-208ENST00000459947 DSTYKQ6XUX3 929 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 TMEM86AQ8N2M4 240 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 CCDC150Q8NCX0 1101 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 ATXN2LQ8WWM7 1075 aaKnown RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 FAXDC2Q96IV6 333 aa11.56□□□□□ -0.56
UBR4-208ENST00000459947 FAM124BQ9H5Z6 455 aaPredicted RBP11.56□□□□□ -0.56
UBR4-208ENST00000459947 ANO9A1A5B4 782 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms