RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CDC45O75419 566 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 B3GAT3O94766 335 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 SEC24AO95486 1093 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 GDI1P31150 447 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 BRCC3P46736 316 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 RBM25P49756 843 aaKnown RBP18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 PPP2R5DQ14738 602 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 UPP1Q16831 310 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 GLRA4Q5JXX5 417 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 N4BP2L1Q5TBK1 243 aaPredicted RBP18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 EEF1DP3Q658K8 133 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 ZNF461Q8TAF7 563 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 BSNDQ8WZ55 320 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 IRF7Q92985 503 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 CORO1BQ9BR76 489 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 LARP6Q9BRS8 491 aaKnown RBP18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 GOLGA2P5Q9HBQ8 144 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 ANGPTL2Q9UKU9 493 aa18.98■□□□□ 0.63
UBE2D4-209ENST00000454428 USO1O60763 962 aaKnown RBP18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 MICAL2O94851 1124 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 PAPSS2O95340 614 aaPredicted RBP18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 PSMC3P17980 439 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 VIPR2P41587 438 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 PTGDRQ13258 359 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 ANKS3Q6ZW76 656 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 MAEAQ7L5Y9 396 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 SLFN12Q8IYM2 578 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 SMARCD2Q92925 531 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 CCDC113Q9H0I3 377 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 RBM12Q9NTZ6 932 aaKnown RBP18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 GDAQ9Y2T3 454 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 SDK1Q7Z5N4 2213 aa18.97■□□□□ 0.63
UBE2D4-209ENST00000454428 ZFYVE26Q68DK2 2539 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 N4BP3O15049 544 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 MARCH6O60337 910 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 DTNBO60941 627 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 LRG1P02750 347 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 CCNE1P24864 410 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 SHC2P98077 582 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 TCEAL8Q8IYN2 117 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 HS6ST3Q8IZP7 471 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 SPEM1Q8N4L4 309 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 FAM160A2Q8N612 972 aaPredicted RBP18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 RSPRY1Q96DX4 576 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 RXFP3Q9NSD7 469 aa18.96■□□□□ 0.63
UBE2D4-209ENST00000454428 CPLX1O14810 134 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 ATF2P15336 505 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 LIMK1P53667 647 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 SOX4Q06945 474 aaPredicted RBP18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 PRPF4BQ13523 1007 aaKnown RBP18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 Q6ZS52 159 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 RUFY3Q7L099 469 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 LONP2Q86WA8 852 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 TRPV4Q9HBA0 871 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 INSL5Q9Y5Q6 135 aa18.95■□□□□ 0.62
UBE2D4-209ENST00000454428 PRRG1O14668 218 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 SPATA31C1P0DKV0 1188 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 GJA1P17302 382 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 KCNA4P22459 653 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 PSMA5P28066 241 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 CNR2P34972 360 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 STK3Q13188 491 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 DDX1Q92499 740 aaKnown RBP18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 NAP1L4Q99733 375 aaKnown RBP18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 CYP4F11Q9HBI6 524 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 ZSWIM6Q9HCJ5 1215 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 CEP72Q9P209 647 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 PCDHA12Q9UN75 941 aa18.94■□□□□ 0.62
UBE2D4-209ENST00000454428 SPAG17Q6Q759 2223 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 ACKR2O00590 384 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 WNT7AO00755 349 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 ZNF197O14709 1029 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 PRKCBP05771 671 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 SOX9P48436 509 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 EPHA5P54756 1037 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 MLLT6P55198 1093 aaPredicted RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 MRPL58Q14197 206 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 SF3A2Q15428 464 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 HEATR6Q6AI08 1181 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 PDZD4Q76G19 769 aaPredicted RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 MFSD6LQ8IWD5 586 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 ZBTB8OSQ8IWT0 167 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 ZSCAN18Q8TBC5 510 aaPredicted RBP18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 DEPDC1BQ8WUY9 529 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 TNFRSF25Q93038 417 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 UROC1Q96N76 676 aa18.93■□□□□ 0.62
UBE2D4-209ENST00000454428 ZNF263O14978 683 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 XRCC6P12956 609 aaKnown RBP eCLIP18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 ELF1P32519 619 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 NR5A1Q13285 461 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 CCDC6Q16204 474 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 MAPK6Q16659 721 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 CCDC43Q96MW1 224 aaKnown RBP18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 ADPGKQ9BRR6 497 aa18.92■□□□□ 0.62
UBE2D4-209ENST00000454428 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms