RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FAM117BQ6P1L5 589 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 C1orf127Q8N9H9 656 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 PHOSPHO2Q8TCD6 241 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 C18orf25Q96B23 403 aaPredicted RBP15.81■□□□□ 0.12
SHANK2-210ENST00000449116 FAM84AQ96KN4 292 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 GDF15Q99988 308 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 RTN4Q9NQC3 1192 aaKnown RBP15.81■□□□□ 0.12
SHANK2-210ENST00000449116 TBC1D13Q9NVG8 400 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 DPP3Q9NY33 737 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 IFNKQ9P0W0 207 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 ITGA11Q9UKX5 1188 aa15.81■□□□□ 0.12
SHANK2-210ENST00000449116 GTPBP10A4D1E9 387 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 PHACTR2O75167 634 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 GJB5O95377 273 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 TPM3P06753 285 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 UBXN1Q04323 297 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 TMCO2Q7Z6W1 182 aaPredicted RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 LRRC43Q8N309 656 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 ZNF689Q96CS4 500 aaPredicted RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 RNPC3Q96LT9 517 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 TRIM5Q9C035 493 aa15.8■□□□□ 0.12
SHANK2-210ENST00000449116 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 XPO4Q9C0E2 1151 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 RC3H2Q9HBD1 1191 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
SHANK2-210ENST00000449116 TRIP11Q15643 1979 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 AP5Z1O43299 807 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 ITGB3P05106 788 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 ATP2A2P16615 1042 aaKnown RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 LRPAP1P30533 357 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 RNASELQ05823 741 aaKnown RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 SOX4Q06945 474 aaPredicted RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 TUSC3Q13454 348 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 TRPC3Q13507 836 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 SHHQ15465 462 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 HERC6Q8IVU3 1022 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 CMTR2Q8IYT2 770 aaKnown RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 FBXL13Q8NEE6 735 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 CXorf38Q8TB03 319 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 FAM193BQ96PV7 902 aaPredicted RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 YME1L1Q96TA2 773 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 GOLGA2P5Q9HBQ8 144 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 COQ4Q9Y3A0 265 aa15.79■□□□□ 0.12
SHANK2-210ENST00000449116 R3HCC1Q9Y3T6 440 aaKnown RBP15.79■□□□□ 0.12
SHANK2-210ENST00000449116 TEX33O43247 280 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 VNN1O95497 513 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 HLA-DRAP01903 254 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 KRT19P08727 400 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 POLR2BP30876 1174 aaKnown RBP15.78■□□□□ 0.12
SHANK2-210ENST00000449116 PIK3CAP42336 1068 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 MRE11P49959 708 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 RBP5P82980 135 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 HTRA4P83105 476 aaPredicted RBP15.78■□□□□ 0.12
SHANK2-210ENST00000449116 DSC1Q08554 894 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 NCOA4Q13772 614 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 EXOC3L4Q17RC7 722 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 PAN2Q504Q3 1202 aaKnown RBP15.78■□□□□ 0.12
SHANK2-210ENST00000449116 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 C9orf57Q5W0N0 161 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 GBP6Q6ZN66 633 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 COLGALT2Q8IYK4 626 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 TMEM130Q8N3G9 435 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 UROC1Q96N76 676 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 ERGIC2Q96RQ1 377 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 RAB20Q9NX57 234 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 GCNT4Q9P109 453 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 SIX4Q9UIU6 781 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 PTPRSQ13332 1948 aa15.78■□□□□ 0.12
SHANK2-210ENST00000449116 COL4A6Q14031 1691 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 A0A1W2PQC6 194 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 CASTOR2A6NHX0 329 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 PIRO00625 290 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 DDHD2O94830 711 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 CST3P01034 146 aaPredicted RBP15.77■□□□□ 0.12
SHANK2-210ENST00000449116 RPL9P32969 192 aaKnown RBP15.77■□□□□ 0.12
SHANK2-210ENST00000449116 BMP8BP34820 402 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 BTG3Q14201 252 aaPredicted RBP15.77■□□□□ 0.12
SHANK2-210ENST00000449116 ZNF280BQ86YH2 543 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 CCDC150Q8NCX0 1101 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 EHBP1Q8NDI1 1231 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 DDX27Q96GQ7 796 aaKnown RBP15.77■□□□□ 0.12
SHANK2-210ENST00000449116 TMEM175Q9BSA9 504 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 CRACR2AQ9BSW2 395 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 NRDE2Q9H7Z3 1164 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 AGAP1Q9UPQ3 857 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 INSL6Q9Y581 213 aa15.77■□□□□ 0.12
SHANK2-210ENST00000449116 TDRD15B5MCY1 1934 aaKnown RBP15.76■□□□□ 0.11
SHANK2-210ENST00000449116 CEP290O15078 2479 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 FNDC1Q4ZHG4 1894 aaPredicted RBP15.76■□□□□ 0.11
SHANK2-210ENST00000449116 PODXLO00592 558 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 B4GALT3O60512 393 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 ATICP31939 592 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 CLCNKBP51801 687 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 ZNF75DP51815 510 aa15.76■□□□□ 0.11
SHANK2-210ENST00000449116 KCNMA1Q12791 1236 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms