RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 L1RE1Q9UN81 338 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 NUB1Q9Y5A7 615 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 PCDHB4Q9Y5E5 795 aa20.22■□□□□ 0.83
SEMA3D-202ENST00000444867 A0A087WZ62 844 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 PGRMC1O00264 195 aaKnown RBP20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 IGF2BP3O00425 579 aaKnown RBP eCLIP20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 B4GALT5O43286 388 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 TNNC2P02585 160 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 INHBEP58166 350 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 TNNC1P63316 161 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 AMHR2Q16671 573 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 SGSM1Q2NKQ1 1148 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 EEF1DP3Q658K8 133 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 C8orf74Q6P047 294 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 ZNF410Q86VK4 478 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 RPS6KC1Q96S38 1066 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 FDXACB1Q9BRP7 624 aaPredicted RBP20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 LRRC1Q9BTT6 524 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 RPF1Q9H9Y2 349 aaKnown RBP20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 TMEM59LQ9UK28 342 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 MGAMO43451 1857 aa20.21■□□□□ 0.83
SEMA3D-202ENST00000444867 MAP2K7O14733 419 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 CEP104O60308 925 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 TMEM191BP0C7N4 346 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 MYBL1P10243 752 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 UNGP13051 313 aaPredicted RBP20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 THNSL1Q8IYQ7 743 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 UBR7Q8N806 425 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 ELMO3Q96BJ8 720 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF653Q96CK0 615 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 ZBTB10Q96DT7 871 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 MTMR12Q9C0I1 747 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 CARD9Q9H257 536 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 AVENQ9NQS1 362 aaPredicted RBP20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 A6NJR5 290 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 DDX3YO15523 660 aaKnown RBP20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 TNFRSF8P28908 595 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 TRPC3Q13507 836 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 RGMBQ6NW40 437 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 CCNI2Q6ZMN8 369 aaPredicted RBP20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 FAXDC2Q96IV6 333 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF668Q96K58 619 aaPredicted RBP20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 STIM2Q9P246 746 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 DOCK3Q8IZD9 2030 aa20.2■□□□□ 0.82
SEMA3D-202ENST00000444867 CCDC188H7C350 402 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 CYP1A1P04798 512 aaPredicted RBP20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 IQCF3P0C7M6 154 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF132P52740 706 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 C17orf99Q6UX52 265 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 RBBP8NLQ8NC74 664 aaPredicted RBP20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF564Q8TBZ8 553 aaPredicted RBP20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 USP6NLQ92738 828 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 GNEQ9Y223 722 aaKnown RBP20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 ALG6Q9Y672 507 aa20.19■□□□□ 0.82
SEMA3D-202ENST00000444867 SASH3O75995 380 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 CST3P01034 146 aaPredicted RBP20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 VTNP04004 478 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 GNA15P30679 374 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 YWHAEP62258 255 aaKnown RBP20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 CENPCQ03188 943 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 OLFML2BQ68BL8 750 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 TMEM270Q6UE05 265 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 UBL4BQ8N7F7 174 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 NLRP7Q8WX94 980 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 NAP1L3Q99457 506 aaPredicted RBP20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 NUP85Q9BW27 656 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 PDZD7Q9H5P4 517 aa20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 NOC2LQ9Y3T9 749 aaKnown RBP20.18■□□□□ 0.82
SEMA3D-202ENST00000444867 GPR25O00155 361 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 MYL6P60660 151 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 CBX1P83916 185 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 TFAMQ00059 246 aaKnown RBP20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 IFNL1Q8IU54 200 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 MCOLN2Q8IZK6 566 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 VCPIP1Q96JH7 1222 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 ASB7Q9H672 318 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 CNOT8Q9UFF9 292 aaKnown RBP20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 UMODL1Q5DID0 1318 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 NRCAMQ92823 1304 aa20.17■□□□□ 0.82
SEMA3D-202ENST00000444867 DYNC1LI2O43237 492 aaPredicted RBP20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ADCY6O43306 1168 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 CLSTN1O94985 981 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 F2P00734 622 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 SLC10A3P09131 477 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 ZNF865P0CJ78 1059 aaPredicted RBP20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 STAG3L1P0CL83 205 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 RGS2P41220 211 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 PLA2G4AP47712 749 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 SAPCD2Q86UD0 394 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 KIAA0319LQ8IZA0 1049 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 SOCS4Q8WXH5 440 aa20.16■□□□□ 0.82
SEMA3D-202ENST00000444867 DMGDHQ9UI17 866 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms