RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SLFN14P0C7P3 912 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SPATA31D3P0C874 917 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 CXCL8P10145 99 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 PROZP22891 400 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 CTHP32929 405 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 PPM1AP35813 382 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SYKP43405 635 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 CLCNKBP51801 687 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 MRPS5P82675 430 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 UBE3AQ05086 875 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SOX4Q06945 474 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 DSC1Q08554 894 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 GRIK3Q13003 919 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 COASYQ13057 564 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ADAM15Q13444 863 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 TUSC3Q13454 348 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 HSP90AA2PQ14568 343 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SMC1AQ14683 1233 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 BMS1Q14692 1282 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 TIGD5Q53EQ6 642 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SLC39A4Q6P5W5 647 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ALKAL1Q6UXT8 129 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SPATA31D4Q6ZUB0 917 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 NELFCDQ8IXH7 590 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 FAM160A2Q8N612 972 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZSWIM2Q8NEG5 633 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 POMGNT1Q8WZA1 660 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 C18orf25Q96B23 403 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SAAL1Q96ER3 474 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZMAT2Q96NC0 199 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 TMEM175Q9BSA9 504 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 VN1R3Q9BXE9 311 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 TRIM9Q9C026 710 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 CUEDC2Q9H467 287 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 TOPORSQ9NS56 1045 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 MARCH5Q9NX47 278 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 THEGQ9P2T0 379 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 SEL1LQ9UBV2 794 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 AGO2Q9UKV8 859 aaKnown RBP6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 HPSEQ9Y251 543 aa6.29□□□□□ -1.4
HMGB3P24-201ENST00000433260 A0A0B4J269 797 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 FRMD3A2A2Y4 597 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 C2orf71A6NGG8 1288 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 I3L4J1 428 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 CLIC2O15247 247 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 OGTO15294 1046 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 INPPL1O15357 1258 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 DXOO77932 396 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 B3GAT3O94766 335 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 CLTAP09496 248 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 CCNYL3P0C7X3 344 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 RPL17P18621 184 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 KLRC2P26717 231 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 LTBRP36941 435 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 BRCC3P46736 316 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 NDUFV1P49821 464 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MMP16P51512 607 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MCL1Q07820 350 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 NAB2Q15742 525 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 DUSP6Q16828 381 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 L1TD1Q5T7N2 865 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 FAM171A1Q5VUB5 890 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ISM2Q6H9L7 571 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 SLFN12LQ6IEE8 588 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 DCLRE1AQ6PJP8 1040 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PRSS55Q6UWB4 352 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 KRBA2Q6ZNG9 492 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 UNC13DQ70J99 1090 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PALB2Q86YC2 1186 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MAP4K3Q8IVH8 894 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 MRPL43Q8N983 215 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 LRRN4Q8WUT4 740 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ATXN2LQ8WWM7 1075 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 RIN2Q8WYP3 895 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ERCC4Q92889 916 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PPP2R3CQ969Q6 453 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PABPC5Q96DU9 382 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 KLHL5Q96PQ7 755 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ASB2Q96Q27 587 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PPP1R10Q96QC0 940 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 PYM1Q9BRP8 204 aaKnown RBP6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 FAM213AQ9BRX8 229 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 STRA6Q9BX79 667 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 GPR62Q9BZJ7 368 aa6.28□□□□□ -1.4
HMGB3P24-201ENST00000433260 ZBP1Q9H171 429 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms