RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PASD1Q8IV76 773 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 STAG1Q8WVM7 1258 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 ALG13Q9NP73 1137 aaKnown RBP6.33□□□□□ -1.4
LINC00458-202ENST00000427299 INSL6Q9Y581 213 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 ASXL1Q8IXJ9 1541 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 RTEL1-TNFRSF6BF6WH68 1400 aa6.33□□□□□ -1.4
LINC00458-202ENST00000427299 ZMYM3Q14202 1370 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 SETBP1Q9Y6X0 1596 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 PPLO60437 1756 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 EFCAB6Q5THR3 1501 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 LCHNA4D1U4 455 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 UNC119BA6NIH7 251 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 B5MCH6 92 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 INO80B-WBP1J3KQ70 363 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 RAB11FIP3O75154 756 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 PHC1P78364 1004 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 APBA1Q02410 837 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 DDX46Q7L014 1031 aaKnown RBP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 GLB1L2Q8IW92 636 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 FAM98AQ8NCA5 519 aaKnown RBP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 CAVIN3Q969G5 261 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 INO80BQ9C086 356 aaPredicted RBP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 EVLQ9UI08 416 aaPredicted RBP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 PPP2R3BQ9Y5P8 575 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 NUMBLQ9Y6R0 609 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 SCAF11Q99590 1463 aaKnown RBP6.32□□□□□ -1.4
LINC00458-202ENST00000427299 MROH2AA6NES4 1674 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 QRICH2Q9H0J4 1663 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 PIK3C2GO75747 1445 aa6.32□□□□□ -1.4
LINC00458-202ENST00000427299 SPATA31A6Q5VVP1 1343 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 ANKRD26Q9UPS8 1709 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 LTA4HP09960 611 aaKnown RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 BPIP17213 487 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 MGAT1P26572 445 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 CDKN1CP49918 316 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 NEK4P51957 841 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 RRP1P56182 461 aaKnown RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 ANAPC15P60006 121 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 BLOC1S1P78537 153 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 PPARAQ07869 468 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 TP53BP2Q13625 1128 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 ABHD17BQ5VST6 288 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 ZNF610Q8N9Z0 462 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 SIMC1Q8NDZ2 872 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 LEO1Q8WVC0 666 aaPredicted RBP6.31□□□□□ -1.4
LINC00458-202ENST00000427299 ASB10Q8WXI3 467 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 POLR3GLQ9BT43 218 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 MS4A5Q9H3V2 200 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 PRSS50Q9UI38 385 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
LINC00458-202ENST00000427299 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 MARCH6O60337 910 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 TMEM127O75204 238 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 SPDEFO95238 335 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 CLEC2LP0C7M8 214 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 RBP3P10745 1247 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 EGR2P11161 476 aaPredicted RBP6.3□□□□□ -1.4
LINC00458-202ENST00000427299 TMF1P82094 1093 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 BMT2Q1RMZ1 405 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 CCDC184Q52MB2 194 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 EFCAB12Q6NXP0 572 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 GLCCI1Q86VQ1 547 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 SMC1BQ8NDV3 1235 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
LINC00458-202ENST00000427299 CDC5LQ99459 802 aaKnown RBP6.3□□□□□ -1.4
LINC00458-202ENST00000427299 NEU1Q99519 415 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 TYW1Q9NV66 732 aaKnown RBP6.3□□□□□ -1.4
LINC00458-202ENST00000427299 PLCH2O75038 1416 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 KANK1Q14678 1352 aa6.3□□□□□ -1.4
LINC00458-202ENST00000427299 MROH1Q8NDA8 1641 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 TCERG1O14776 1098 aaKnown RBP6.29□□□□□ -1.4
LINC00458-202ENST00000427299 ITGA10O75578 1167 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 HLA-DOAP06340 250 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 SPATA31D3P0C874 917 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 CNGA1P29973 690 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 CXCR5P32302 372 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 PTH2RP49190 550 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
LINC00458-202ENST00000427299 MEF2AQ02078 507 aaPredicted RBP6.29□□□□□ -1.4
LINC00458-202ENST00000427299 TERF2Q15554 542 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 ERCC6LQ2NKX8 1250 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 SPATA31D4Q6ZUB0 917 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 RNF169Q8NCN4 708 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 RSAD2Q8WXG1 361 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
LINC00458-202ENST00000427299 HECW2Q9P2P5 1572 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 FPGT-TNNI3KV9GXZ4 949 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 PPRC1Q5VV67 1664 aaKnown RBP6.29□□□□□ -1.4
LINC00458-202ENST00000427299 ADGRB3O60242 1522 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 LMTK2Q8IWU2 1503 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 NPC1L1Q9UHC9 1359 aa6.29□□□□□ -1.4
LINC00458-202ENST00000427299 PLA2R1Q13018 1463 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms