RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
PKP4-204ENST00000421462 PHLPP1O60346 1717 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 PI4K2BG5E9Z4 385 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GYG2O15488 501 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 VHLP40337 213 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GTF2IP78347 998 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 RASIP1Q5U651 963 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 PPP1R18Q6NYC8 613 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GLIS1Q8NBF1 620 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 KIFAP3Q92845 792 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ZNF333Q96JL9 665 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 CYTH2Q99418 400 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 CADM1Q9BY67 442 aaKnown RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 RTN3O95197 1032 aaPredicted RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 VAMP7P51809 220 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 CCDC15Q0P6D6 951 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 MOGSQ13724 837 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ZNF568Q3ZCX4 644 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 PLEKHG4Q58EX7 1191 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ACSBG2Q5FVE4 666 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 PCNX4Q63HM2 1172 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GALNT15Q8N3T1 639 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 LMO3Q8TAP4 145 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 CPA5Q8WXQ8 436 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 LENG9Q96B70 501 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 TMEM117Q9H0C3 514 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ARL8BQ9NVJ2 186 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ROBO1Q9Y6N7 1651 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 EDF1O60869 148 aaKnown RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 SKIP12755 728 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 ACADSP16219 412 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 PTPN4P29074 926 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 CETN2P41208 172 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 RASA3Q14644 834 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GPATCH4Q5T3I0 446 aaKnown RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 FOXB2Q5VYV0 432 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 C4orf50Q6ZRC1 276 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 TRABD2AQ86V40 505 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 WDR60Q8WVS4 1066 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 GBP5Q96PP8 586 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 NAP1L4Q99733 375 aaKnown RBP17.66■□□□□ 0.42
PKP4-204ENST00000421462 DCLK3Q9C098 648 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 OLFML3Q9NRN5 406 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 WDR35Q9P2L0 1181 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 HEY2Q9UBP5 337 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 WASF2Q9Y6W5 498 aa17.66■□□□□ 0.42
PKP4-204ENST00000421462 IFNB1P01574 187 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 GAP43P17677 238 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 KRT4P19013 534 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 ADRA1DP25100 572 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 CNGA1P29973 690 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 FMO1Q01740 532 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 TRAF1Q13077 416 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 STAT4Q14765 748 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 PDCD7Q8N8D1 485 aaKnown RBP17.65■□□□□ 0.42
PKP4-204ENST00000421462 C10orf82Q8WW14 230 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 INPP5DQ92835 1189 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 NAV1Q8NEY1 1877 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 DDX60LQ5H9U9 1706 aaKnown RBP17.65■□□□□ 0.42
PKP4-204ENST00000421462 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 TBX10O75333 385 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 NPTXRO95502 500 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 CFBP00751 764 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 ETS2P15036 469 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 FYB2Q5VWT5 728 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 ZBED8Q8IZ13 594 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 PSPC1Q8WXF1 523 aaKnown RBP17.65■□□□□ 0.42
PKP4-204ENST00000421462 ARMCX1Q9P291 453 aa17.65■□□□□ 0.42
PKP4-204ENST00000421462 FSCN2O14926 492 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 SLITRK3O94933 977 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 BAG2O95816 211 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 THOC5Q13769 683 aaKnown RBP17.64■□□□□ 0.41
PKP4-204ENST00000421462 MAPK6Q16659 721 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 SLFN13Q68D06 897 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 C1orf186Q6ZWK4 172 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 CLNKQ7Z7G1 428 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 PPFIBP2Q8ND30 876 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 B4GALNT2Q8NHY0 566 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 FBXO41Q8TF61 875 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 MAML1Q92585 1016 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 KREMEN1Q96MU8 473 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 EPAS1Q99814 870 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 USP20Q9Y2K6 914 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 DAGLAQ9Y4D2 1042 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 KRT10P13645 584 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 ATF7P17544 494 aaPredicted RBP17.64■□□□□ 0.41
PKP4-204ENST00000421462 MXI1P50539 228 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 GPSM2P81274 684 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 PLCB3Q01970 1234 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 WASHC2DQ5SRD0 308 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
PKP4-204ENST00000421462 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
PKP4-204ENST00000421462 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 ZNF148Q9UQR1 794 aa17.64■□□□□ 0.41
PKP4-204ENST00000421462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.64■□□□□ 0.41
PKP4-204ENST00000421462 ATP8B3O60423 1300 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms