RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 XYLBO75191 536 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 HARSP12081 509 aaKnown RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 FSHRP23945 695 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 HOXA9P31269 272 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 RPL9P32969 192 aaKnown RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 LONP1P36776 959 aaKnown RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 MCL1Q07820 350 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 CUL4AQ13619 759 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 NOLC1Q14978 699 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUP50-205ENST00000419387 SF3A1Q15459 793 aaKnown RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 SLC10A6Q3KNW5 377 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 AXDND1Q5T1B0 1012 aaPredicted RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 RSPO2Q6UXX9 243 aaPredicted RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 RTL10Q7L3V2 364 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 GET4Q7L5D6 327 aaPredicted RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 HAUS6Q7Z4H7 955 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 TMEM105Q8N8V8 129 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 FLCNQ8NFG4 579 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 KCNN1Q92952 543 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 PHOX2BQ99453 314 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 ANKFY1Q9P2R3 1169 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 WNT16Q9UBV4 365 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 FBXL21Q9UKT6 434 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 ODF2LQ9ULJ1 636 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 CDY1Q9Y6F8 540 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 ZFP37Q9Y6Q3 630 aaPredicted RBP10.31□□□□□ -0.76
NUP50-205ENST00000419387 KMT2EQ8IZD2 1858 aa10.31□□□□□ -0.76
NUP50-205ENST00000419387 ANHXE9PGG2 379 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 SYN3O14994 580 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 CCL16O15467 120 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 MEFVO15553 781 aaPredicted RBP10.3□□□□□ -0.76
NUP50-205ENST00000419387 POU2F2P09086 479 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 NPR3P17342 541 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 SCP2P22307 547 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 MATR3P43243 847 aaKnown RBP eCLIP10.3□□□□□ -0.76
NUP50-205ENST00000419387 NTHL1P78549 312 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 GRIN1Q05586 938 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 DHX8Q14562 1220 aaKnown RBP10.3□□□□□ -0.76
NUP50-205ENST00000419387 MCM6Q14566 821 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 SEZ6Q53EL9 994 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 GPBP1Q86WP2 473 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 SIX5Q8N196 739 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 MYCT1Q8N699 235 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 SLC7A14Q8TBB6 771 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 LRRC15Q8TF66 581 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 ATOH1Q92858 354 aaPredicted RBP10.3□□□□□ -0.76
NUP50-205ENST00000419387 C18orf25Q96B23 403 aaPredicted RBP10.3□□□□□ -0.76
NUP50-205ENST00000419387 BICD1Q96G01 975 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 HAPLN2Q9GZV7 340 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 PLEKHA5Q9HAU0 1116 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 BLOC1S4Q9NUP1 217 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 NUB1Q9Y5A7 615 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 TRIP11Q15643 1979 aa10.3□□□□□ -0.76
NUP50-205ENST00000419387 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 VPS37CA5D8V6 355 aaPredicted RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 H0Y858 1186 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 H7C4K7 107 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 TBC1D4O60343 1298 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 ABLIM3O94929 683 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 FAM13AO94988 1023 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 KRT18P05783 430 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 CFHP08603 1231 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 CLTAP09496 248 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 SRFP11831 508 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 PLCG1P19174 1290 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 AOC1P19801 751 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 PDCP20941 246 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 ZNF131P52739 623 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 HTR4Q13639 388 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 MRPL58Q14197 206 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 KARSQ15046 597 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 KYAT1Q16773 422 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 VARS2Q5ST30 1063 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 CWF19L1Q69YN2 538 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 SLC8B1Q6J4K2 584 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 RASSF8Q8NHQ8 419 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 ZNF461Q8TAF7 563 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 RAD54LQ92698 747 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 SUSD3Q96L08 255 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 RTP3Q9BQQ7 232 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 REEP2Q9BRK0 252 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 KRTAP3-3Q9BYR6 98 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 KRTAP3-2Q9BYR7 98 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 PARVGQ9HBI0 331 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 FAM86C1Q9NVL1 165 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 DNMT3BQ9UBC3 853 aaKnown RBP10.29□□□□□ -0.76
NUP50-205ENST00000419387 CDH7Q9ULB5 785 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 TBX20Q9UMR3 447 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 NUMBLQ9Y6R0 609 aa10.29□□□□□ -0.76
NUP50-205ENST00000419387 PIEZO1Q92508 2521 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 TTC26A0AVF1 554 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 LACTBL1A8MY62 500 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 K7ENM7 598 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 STK25O00506 426 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 PI15O43692 258 aa10.28□□□□□ -0.76
NUP50-205ENST00000419387 TRAK2O60296 914 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms