RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GINS2Q9Y248 185 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 FNTAP49354 379 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 PRCCQ92733 491 aaPredicted RBP13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 OSBPL8Q9BZF1 889 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 DHX15O43143 795 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 CSDE1O75534 798 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 SUN1O94901 812 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 TAS2R40P59535 323 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 DNAJC3Q13217 504 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 C11orf63Q6NUN7 778 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 ANKRD35Q8N283 1001 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 SHC3Q92529 594 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 PICK1Q9NRD5 415 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
PPP4R1-202ENST00000400555 CLNS1AP54105 237 aaKnown RBP13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 CYP24A1Q07973 514 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 TRPC3Q13507 836 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 HELQQ8TDG4 1101 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 ZNF862O60290 1169 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 GZMAP12544 262 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 CA4P22748 312 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 ARSEP51690 589 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 RPL7AP62424 266 aaKnown RBP13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 PITPNM3Q9BZ71 974 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 KLHL14Q9P2G3 628 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 FBXO40Q9UH90 709 aa13.46□□□□□ -0.25
PPP4R1-202ENST00000400555 KCNJ2P63252 427 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 GTF2BQ00403 316 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 KRT76Q01546 638 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 CXCL9Q07325 125 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 MCOLN2Q8IZK6 566 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 CYP4X1Q8N118 509 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 SGSM3Q96HU1 749 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 MCEEQ96PE7 176 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 WRNIP1Q96S55 665 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 MOV10L1Q9BXT6 1211 aaKnown RBP13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 UMODL1Q5DID0 1318 aa13.46□□□□□ -0.26
PPP4R1-202ENST00000400555 TCF4P15884 667 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 RFX1P22670 979 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 BRD2P25440 801 aaKnown RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 IGBP1P78318 339 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 ALCAMQ13740 583 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CLUL1Q15846 466 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CLEC16AQ2KHT3 1053 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 HHATQ5VTY9 493 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 ATL2Q8NHH9 583 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 DCTN4Q9UJW0 460 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 H0Y3Z8 333 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CPP00450 1065 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 DPEP1P16444 411 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CNGA2Q16280 664 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 FHDC1Q9C0D6 1143 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 UBE4BO95155 1302 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 ADGRA3Q8IWK6 1321 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 CCND2P30279 289 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 JAK3P52333 1124 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 BBS9Q3SYG4 887 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 SLC7A3Q8WY07 619 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 TLCD1Q96CP7 247 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 JPH1Q9HDC5 661 aaPredicted RBP13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
PPP4R1-202ENST00000400555 IGF2BP3O00425 579 aaKnown RBP eCLIP13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 PSAPP07602 524 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 SCARA3Q6AZY7 606 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 DNAJC24Q6P3W2 148 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 GRK7Q8WTQ7 553 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 LRRN4Q8WUT4 740 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 CALN1Q9BXU9 219 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 C12orf65Q9H3J6 166 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 ATP6V0A4Q9HBG4 840 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 PCYOX1Q9UHG3 505 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 SPATA31A6Q5VVP1 1343 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 ADAMTSL1Q8N6G6 1762 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 ACTR2P61160 394 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 TRIM68Q6AZZ1 485 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 LRRC71Q8N4P6 559 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 GLIS1Q8NBF1 620 aa13.44□□□□□ -0.26
PPP4R1-202ENST00000400555 TMEM121Q9BTD3 319 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms