RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FBXW11Q9UKB1 542 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 BACE2Q9Y5Z0 518 aa14.98□□□□□ -0.01
CXCL12-205ENST00000395794 MORC2Q9Y6X9 1032 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-205ENST00000395794 CLUHO75153 1309 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 SYN3O14994 580 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 XYLBO75191 536 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 PIGRP01833 764 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 ASGR2P07307 311 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 C8AP07357 584 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 GAP43P17677 238 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 NMT1P30419 496 aaKnown RBP14.97□□□□□ -0.01
CXCL12-205ENST00000395794 MCM4P33991 863 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 BRCC3P46736 316 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 GTF2BQ00403 316 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 CD302Q8IX05 232 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 C3orf58Q8NDZ4 430 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 APPL2Q8NEU8 664 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 DDX12PQ92771 950 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 ZNF707Q96C28 371 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-205ENST00000395794 KIF12Q96FN5 646 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 TSPAN18Q96SJ8 248 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 PANK2Q9BZ23 570 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 KCNH6Q9H252 994 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 MRPL44Q9H9J2 332 aaKnown RBP14.97□□□□□ -0.01
CXCL12-205ENST00000395794 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.01
CXCL12-205ENST00000395794 UBQLN1Q9UMX0 589 aaKnown RBP14.97□□□□□ -0.01
CXCL12-205ENST00000395794 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 CDY1Q9Y6F8 540 aa14.97□□□□□ -0.01
CXCL12-205ENST00000395794 A0A0B4J269 797 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 SPTLC2O15270 562 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 ELF1P32519 619 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 PLA2G5P39877 138 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 NASPP49321 788 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-205ENST00000395794 UVSSAQ2YD98 709 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
CXCL12-205ENST00000395794 AXDND1Q5T1B0 1012 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-205ENST00000395794 ADALQ6DHV7 355 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 CD300LGQ6UXG3 332 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 RTL10Q7L3V2 364 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 MAP4K3Q8IVH8 894 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 FBXL6Q8N531 539 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 FEZF2Q8TBJ5 459 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 HVCN1Q96D96 273 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 LRRC27Q9C0I9 530 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 ST6GALNAC4Q9H4F1 302 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 IGSF9Q9P2J2 1179 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
CXCL12-205ENST00000395794 EXOC7Q9UPT5 735 aa14.96□□□□□ -0.01
CXCL12-205ENST00000395794 TTC26A0AVF1 554 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 LACTBL1A8MY62 500 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 ADAM12O43184 909 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 PPP6R2O75170 966 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 PAPLNO95428 1278 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 IDEP14735 1019 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 CYP3A5P20815 502 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 IGFBP6P24592 240 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-205ENST00000395794 HOXA9P31269 272 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 TNFSF9P41273 254 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 ARPP19P56211 112 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 SPAG1Q07617 926 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 TDGQ13569 410 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 POSTNQ15063 836 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 ZC2HC1CQ53FD0 456 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-205ENST00000395794 FOXD4L5Q5VV16 416 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-205ENST00000395794 ZNF720Q7Z2F6 126 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 SFR1Q86XK3 245 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 LINC00301Q8NCQ3 95 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 FOXD4L4Q8WXT5 416 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-205ENST00000395794 SUSD3Q96L08 255 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 HAPLN2Q9GZV7 340 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
CXCL12-205ENST00000395794 MYMKA6NI61 221 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 PRRG1O14668 218 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 CCL16O15467 120 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 MEFVO15553 781 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-205ENST00000395794 YEATS4O95619 227 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 ZSCAN22P10073 491 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-205ENST00000395794 FSHRP23945 695 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 ENOX2Q16206 610 aaKnown RBP14.94□□□□□ -0.02
CXCL12-205ENST00000395794 CTXN3Q4LDR2 81 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 ZNF280DQ6N043 979 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 GET4Q7L5D6 327 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-205ENST00000395794 GRASPQ7Z6J2 395 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-205ENST00000395794 USP37Q86T82 979 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 SYCP3Q8IZU3 236 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 PDILTQ8N807 584 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 BEST2Q8NFU1 509 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 ZNF461Q8TAF7 563 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 POMGNT1Q8WZA1 660 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 NXPE3Q969Y0 559 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 FIZ1Q96SL8 496 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 PRRX2Q99811 253 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 MFSD1Q9H3U5 465 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 KCNK12Q9HB15 430 aa14.94□□□□□ -0.02
CXCL12-205ENST00000395794 EPS15L1Q9UBC2 864 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms