RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 LRRC8EQ6NSJ5 796 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 SP8Q8IXZ3 490 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 NAF1Q96HR8 494 aaKnown RBP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 SENP7Q9BQF6 1050 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 ATP6V1G2O95670 118 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 SLC9A1P19634 815 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 FXR2P51116 673 aaKnown RBP eCLIP18.11■□□□□ 0.494e-6■■■■□ 21.4
SIN3A-203ENST00000394949 DSG1Q02413 1049 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 DSTYKQ6XUX3 929 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 PACS2Q86VP3 889 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 SASH3O75995 380 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 FSBPO95073 299 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 PSMC5P62195 406 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 EME1Q96AY2 570 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 CCDC90BQ9GZT6 254 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 AFF2P51816 1311 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 GNAT1P11488 350 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 MAP4P27816 1152 aaKnown RBP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 FAM49AQ9H0Q0 323 aaPredicted RBP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 EML4Q9HC35 981 aaKnown RBP18.11■□□□□ 0.49
SIN3A-203ENST00000394949 WDR35Q9P2L0 1181 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 NAGPAQ9UK23 515 aa18.11■□□□□ 0.49
SIN3A-203ENST00000394949 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 SNRPAP09012 282 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 SKOR1P84550 965 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 GRIN1Q05586 938 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 SNRNP48Q6IEG0 339 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 DDI1Q8WTU0 396 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 PSPC1Q8WXF1 523 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 FRMD8Q9BZ67 464 aaPredicted RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 UBTFL6P0CB48 400 aaPredicted RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 CD44P16070 742 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 RAVER2Q9HCJ3 691 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 ADGRB3O60242 1522 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 PHKA2P46019 1235 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 CDH6P55285 790 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 NFX1Q12986 1120 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 PTK7Q13308 1070 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 SLC13A5Q86YT5 568 aaPredicted RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 CNTNAP5Q8WYK1 1306 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 ADCY3O60266 1144 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 NMT1P30419 496 aaKnown RBP18.1■□□□□ 0.49
SIN3A-203ENST00000394949 EP400NLQ6ZTU2 488 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 OR6B3Q8NGW1 331 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 ARHGEF26Q96DR7 871 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 TFR2Q9UP52 801 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 SALL3Q9BXA9 1300 aa18.1■□□□□ 0.49
SIN3A-203ENST00000394949 NLRP11P59045 1033 aaKnown RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 SPP2Q13103 211 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 PIGHQ14442 188 aaPredicted RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 LRRC36Q1X8D7 754 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 KIF9Q9HAQ2 790 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 ZC3H7BQ9UGR2 993 aaKnown RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 BLOC1S6Q9UL45 172 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 PHTF1Q9UMS5 762 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 H0Y626 953 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 AP3B1O00203 1094 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 APOL1O14791 398 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 TRIM16O95361 564 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 GPC3P51654 580 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 TBX2Q13207 712 aaPredicted RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 RCN1Q15293 331 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 CEP55Q53EZ4 464 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 LACRTQ9GZZ8 138 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 SNRPFP62306 86 aaKnown RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 DNAJC3Q13217 504 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 ZCWPW2Q504Y3 356 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 REEP2Q9BRK0 252 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 SATB2Q9UPW6 733 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 SRRM3A6NNA2 597 aaPredicted RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 RPS6KA5O75582 802 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 ACTR2P61160 394 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 EXT2Q93063 718 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 MRPL1Q9BYD6 325 aaKnown RBP18.09■□□□□ 0.49
SIN3A-203ENST00000394949 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
SIN3A-203ENST00000394949 M0QYV0 167 aa18.08■□□□□ 0.49
SIN3A-203ENST00000394949 PLEKP08567 350 aaPredicted RBP18.08■□□□□ 0.49
SIN3A-203ENST00000394949 TARSP26639 723 aaKnown RBP18.08■□□□□ 0.49
SIN3A-203ENST00000394949 C2orf69Q8N8R5 385 aa18.08■□□□□ 0.49
SIN3A-203ENST00000394949 DAGLBQ8NCG7 672 aa18.08■□□□□ 0.49
SIN3A-203ENST00000394949 ZSWIM1Q9BR11 485 aa18.08■□□□□ 0.49
SIN3A-203ENST00000394949 C2orf40Q9H1Z8 148 aa18.08■□□□□ 0.49
SIN3A-203ENST00000394949 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.49
SIN3A-203ENST00000394949 A0A0A6YYK5 440 aaPredicted RBP18.08■□□□□ 0.48
SIN3A-203ENST00000394949 GEMIN4P57678 1058 aaKnown RBP18.08■□□□□ 0.48
SIN3A-203ENST00000394949 NFIXQ14938 502 aa18.08■□□□□ 0.48
SIN3A-203ENST00000394949 OLFML2BQ68BL8 750 aa18.08■□□□□ 0.48
SIN3A-203ENST00000394949 YTHDF3Q7Z739 585 aaKnown RBP18.08■□□□□ 0.48
SIN3A-203ENST00000394949 PRUNE1Q86TP1 453 aa18.08■□□□□ 0.48
SIN3A-203ENST00000394949 RXFP1Q9HBX9 757 aa18.08■□□□□ 0.48
SIN3A-203ENST00000394949 WHRNQ9P202 907 aa18.08■□□□□ 0.48
SIN3A-203ENST00000394949 DAB1O75553 588 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms