RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-202ENST00000394888 PPARDQ03181 441 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 UBLCP1Q8WVY7 318 aaPredicted RBP16.47■□□□□ 0.23
CPSF7-202ENST00000394888 MAF1Q9H063 256 aa16.47■□□□□ 0.23
CPSF7-202ENST00000394888 CWC15Q9P013 229 aaKnown RBP16.47■□□□□ 0.23
CPSF7-202ENST00000394888 GJB6O95452 261 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 SSTR3P32745 418 aaPredicted RBP16.46■□□□□ 0.23
CPSF7-202ENST00000394888 CHKAP35790 457 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 CETN1Q12798 172 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 BIRC3Q13489 604 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 C10orf67Q8IYJ2 551 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 GGA3Q9NZ52 723 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 FAM169AQ9Y6X4 670 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 PMS2P54278 862 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 PHLDB2Q86SQ0 1253 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 WDTC1Q8N5D0 677 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 ATG4AQ8WYN0 398 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 CCT8L2Q96SF2 557 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 TMEM109Q9BVC6 243 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
CPSF7-202ENST00000394888 NAMPTP43490 491 aa16.46■□□□□ 0.22
CPSF7-202ENST00000394888 PLTPP55058 493 aa16.46■□□□□ 0.22
CPSF7-202ENST00000394888 VGLL4Q14135 290 aa16.46■□□□□ 0.22
CPSF7-202ENST00000394888 RIPK2O43353 540 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 IFI35P80217 286 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 MAMLD1Q13495 774 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 SLC29A2Q14542 456 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 CDCA2Q69YH5 1023 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 NLRP14Q86W24 1093 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 DNERQ8NFT8 737 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 ZNF317Q96PQ6 595 aaPredicted RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 TARS2Q9BW92 718 aaKnown RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 MAGOHP61326 146 aaKnown RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 LLGL1Q15334 1064 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 DCAF15Q66K64 600 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 PLEKHA7Q6IQ23 1121 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 UBL4BQ8N7F7 174 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 CXorf38Q8TB03 319 aa16.45■□□□□ 0.22
CPSF7-202ENST00000394888 MAGOHBQ96A72 148 aaKnown RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 AGO2Q9UKV8 859 aaKnown RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 NOVA2Q9UNW9 492 aaKnown RBP16.45■□□□□ 0.22
CPSF7-202ENST00000394888 PROZP22891 400 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 MMP13P45452 471 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 OGDHQ02218 1023 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 CUL2Q13617 745 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 ENOSF1Q7L5Y1 443 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 MDM1Q8TC05 714 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 RAPGEF5Q92565 580 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 PGM2Q96G03 612 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 NAP1L3Q99457 506 aaPredicted RBP16.44■□□□□ 0.22
CPSF7-202ENST00000394888 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 IGKV6-21A0A0C4DH24 114 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 FAM107AO95990 144 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 MAGEA9P43362 315 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 PPP2R2AP63151 447 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 EURLQ9NYK6 297 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 HSPA6P17066 643 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 SCP2P22307 547 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 BAG6P46379 1132 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 C1orf54Q8WWF1 131 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 CGRRF1Q99675 332 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
CPSF7-202ENST00000394888 PTPRHQ9HD43 1115 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 ANAPC7Q9UJX3 599 aa16.44■□□□□ 0.22
CPSF7-202ENST00000394888 CLTAP09496 248 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 FGFR4P22455 802 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 HPDP32754 393 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-202ENST00000394888 PPP2R5EQ16537 467 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 PHF13Q86YI8 300 aaPredicted RBP16.43■□□□□ 0.22
CPSF7-202ENST00000394888 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
CPSF7-202ENST00000394888 EPS8L3Q8TE67 593 aaKnown RBP16.43■□□□□ 0.22
CPSF7-202ENST00000394888 PWWP2AQ96N64 755 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 IQCF3P0C7M6 154 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 SKIDA1Q1XH10 827 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 ZNF677Q86XU0 584 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 ABRAQ8N0Z2 381 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 TMEM134Q9H6X4 195 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 CETPP11597 493 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 RWDD2BP57060 319 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPSF7-202ENST00000394888 GLIS1Q8NBF1 620 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
CPSF7-202ENST00000394888 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-202ENST00000394888 ERMARDQ5T6L9 678 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 TXNRD3NBQ6F5E7 133 aa16.42■□□□□ 0.22
CPSF7-202ENST00000394888 ZBTB10Q96DT7 871 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms