RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GNGT1P63211 74 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 SNX1Q13596 522 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 KCTD2Q14681 263 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 UBAP2Q5T6F2 1119 aaKnown RBP17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 CCDC137Q6PK04 289 aaKnown RBP17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 SCARA5Q6ZMJ2 495 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 ANKRD13AQ8IZ07 590 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 C1orf54Q8WWF1 131 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 MMP19Q99542 508 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 CGRRF1Q99675 332 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 FAM118BQ9BPY3 351 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 ERP44Q9BS26 406 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 WNT8AQ9H1J5 351 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 EFCC1Q9HA90 598 aa17.08■□□□□ 0.33
CNKSR1-202ENST00000374253 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 THAP12O43422 761 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 MSCO60682 206 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 MTA2O94776 668 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 RARAP10276 462 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 CLCN3P51790 818 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 EAPPQ56P03 285 aaPredicted RBP17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 TMC3Q7Z5M5 1100 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 DHX37Q8IY37 1157 aaKnown RBP17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 UVRAGQ9P2Y5 699 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 AGTPBP1Q9UPW5 1226 aa17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
CNKSR1-202ENST00000374253 ANKRD65E5RJM6 399 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PHF2O75151 1096 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PIGRP01833 764 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 CLTAP09496 248 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 ENOSF1Q7L5Y1 443 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 SLC13A5Q86YT5 568 aaPredicted RBP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 FBXO25Q8TCJ0 367 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 ATG4AQ8WYN0 398 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 HERPUD2Q9BSE4 406 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PCDHA3Q9Y5H8 950 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 SPDYE5A6NIY4 337 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 INO80B-WBP1J3KQ70 363 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PRKCBP05771 671 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PTGIRP43119 386 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 SSR1P43307 286 aaKnown RBP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 IRAK1P51617 712 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 RWDD2BP57060 319 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 MYL6P60660 151 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 CELF3Q5SZQ8 465 aaKnown RBP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 DUPD1Q68J44 220 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 PKNOX2Q96KN3 472 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 FMO2Q99518 471 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 INO80BQ9C086 356 aaPredicted RBP17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 RSPH14Q9UHP6 348 aa17.07■□□□□ 0.32
CNKSR1-202ENST00000374253 ZEB2O60315 1214 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 TFAMQ00059 246 aaKnown RBP17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 GUCY1A3Q02108 690 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 PLCB4Q15147 1175 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 LRRC45Q96CN5 670 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 HEMGNQ9BXL5 484 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 H0YGN5 161 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 WEE2P0C1S8 567 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 TGFB3P10600 412 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 RPL21P46778 160 aaKnown RBP17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 MOGSQ13724 837 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 SEC14L1Q92503 715 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 MINDY3Q9H8M7 445 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 ADAM22Q9P0K1 906 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 EVPLQ92817 2033 aa17.06■□□□□ 0.32
CNKSR1-202ENST00000374253 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 KIAA0391O15091 583 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 FAM189A1O60320 539 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 CTNNA2P26232 953 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 GJA5P36382 358 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 RNPEPQ9H4A4 650 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 KCNG1Q9UIX4 513 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 MYO1FO00160 1098 aa17.05■□□□□ 0.32
CNKSR1-202ENST00000374253 TOM1L1O75674 476 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms