RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ZNF461Q8TAF7 563 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 HVCN1Q96D96 273 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 ZMAT2Q96NC0 199 aaKnown RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 RPF1Q9H9Y2 349 aaKnown RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 GOLGA2P5Q9HBQ8 144 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
TMEM53-201ENST00000372235 CLIC4Q9Y696 253 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 CDY1Q9Y6F8 540 aa20.59■□□□□ 0.89
TMEM53-201ENST00000372235 ARHGEF37A1IGU5 675 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 OGTO15294 1046 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 FSHRP23945 695 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 TKTP29401 623 aaKnown RBP20.58■□□□□ 0.89
TMEM53-201ENST00000372235 MARCKSP29966 332 aaPredicted RBP20.58■□□□□ 0.89
TMEM53-201ENST00000372235 MCM4P33991 863 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 GTF2BQ00403 316 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 SOX4Q06945 474 aaPredicted RBP20.58■□□□□ 0.89
TMEM53-201ENST00000372235 RESTQ13127 1097 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 SV2BQ7L1I2 683 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 SUSD3Q96L08 255 aa20.58■□□□□ 0.89
TMEM53-201ENST00000372235 TTC26A0AVF1 554 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 STX6O43752 255 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 LAMP2P13473 410 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 LRPAP1P30533 357 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 BRCC3P46736 316 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 CLCN5P51795 746 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
TMEM53-201ENST00000372235 TPGS2Q68CL5 300 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 ZNF280DQ6N043 979 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 CD300LGQ6UXG3 332 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 MTSS1LQ765P7 747 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 MAP4K3Q8IVH8 894 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 C3orf58Q8NDZ4 430 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 SLC7A14Q8TBB6 771 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 KIF12Q96FN5 646 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 WNT16Q9UBV4 365 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 FBXO2Q9UK22 296 aaPredicted RBP20.57■□□□□ 0.88
TMEM53-201ENST00000372235 FBXL21Q9UKT6 434 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 KCNH3Q9ULD8 1083 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 EXOC7Q9UPT5 735 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 C2orf16Q68DN1 1984 aa20.57■□□□□ 0.88
TMEM53-201ENST00000372235 CITO14578 2027 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 CXCL8P10145 99 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 MYBP10242 640 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 GAP43P17677 238 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 NHLH1Q02575 133 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 GRIN1Q05586 938 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 SLC39A14Q15043 492 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 POSTNQ15063 836 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 GET4Q7L5D6 327 aaPredicted RBP20.56■□□□□ 0.88
TMEM53-201ENST00000372235 SNX21Q969T3 373 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 EPSTI1Q96J88 318 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 MSTO1Q9BUK6 570 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 LRRC27Q9C0I9 530 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 CDH7Q9ULB5 785 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 DERAQ9Y315 318 aa20.56■□□□□ 0.88
TMEM53-201ENST00000372235 A0A0B4J269 797 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 LRG1P02750 347 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 ATF2P15336 505 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 MRPL58Q14197 206 aaKnown RBP20.55■□□□□ 0.88
TMEM53-201ENST00000372235 ASTLQ6HA08 431 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-201ENST00000372235 GRASPQ7Z6J2 395 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-201ENST00000372235 BEST2Q8NFU1 509 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 C18orf25Q96B23 403 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-201ENST00000372235 ZNF396Q96N95 335 aaPredicted RBP20.55■□□□□ 0.88
TMEM53-201ENST00000372235 PCDHB8Q9UN66 801 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 MTMR6Q9Y217 621 aa20.55■□□□□ 0.88
TMEM53-201ENST00000372235 PRRG1O14668 218 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ADAM12O43184 909 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 N4BP1O75113 896 aaKnown RBP20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ABLIM3O94929 683 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ADRB2P07550 413 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 SRFP11831 508 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ALCAMQ13740 583 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 CTXN3Q4LDR2 81 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ZNF720Q7Z2F6 126 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ELMOD1Q8N336 334 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 DDX12PQ92771 950 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 MYADMQ96S97 322 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ASB7Q9H672 318 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 AVENQ9NQS1 362 aaPredicted RBP20.54■□□□□ 0.88
TMEM53-201ENST00000372235 TRIP11Q15643 1979 aa20.54■□□□□ 0.88
TMEM53-201ENST00000372235 ANHXE9PGG2 379 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 I3L4J1 428 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 M0QZQ0 153 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 CCL16O15467 120 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 HSP90AA1P07900 732 aaKnown RBP20.53■□□□□ 0.88
TMEM53-201ENST00000372235 STAT6P42226 847 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 ROR1Q01973 937 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 CEBPZQ03701 1054 aaKnown RBP20.53■□□□□ 0.88
TMEM53-201ENST00000372235 YWHAHQ04917 246 aaPredicted RBP20.53■□□□□ 0.88
TMEM53-201ENST00000372235 ZBTB6Q15916 424 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 PABPC1LQ4VXU2 614 aaKnown RBP20.53■□□□□ 0.88
TMEM53-201ENST00000372235 SEZ6Q53EL9 994 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 USP37Q86T82 979 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 HSCBQ8IWL3 235 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 TCEAL8Q8IYN2 117 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 SLC44A3Q8N4M1 653 aa20.53■□□□□ 0.88
TMEM53-201ENST00000372235 FEZF2Q8TBJ5 459 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms