RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 SUSD6Q92537 303 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 DHTKD1Q96HY7 919 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-202ENST00000371820 CPB2Q96IY4 423 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 FBXL18Q96ME1 805 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-202ENST00000371820 CCSER1Q9C0I3 900 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 THAP9Q9H5L6 903 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 GPRC5CQ9NQ84 441 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 KCNG1Q9UIX4 513 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 GIT1Q9Y2X7 761 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 MRFAP1Q9Y605 127 aa11.28□□□□□ -0.6
COL5A1-202ENST00000371820 A0A087WWV3 80 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 A0A1B0GUA9 196 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 CTAGE9A4FU28 777 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 INPPL1O15357 1258 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 ALDH2P05091 517 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 PRKCBP05771 671 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 GALTP07902 379 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 CA8P35219 290 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 PBX3P40426 434 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 UBA7P41226 1012 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 NHLH1Q02575 133 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 PPP2R3AQ06190 1150 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 PRPF4BQ13523 1007 aaKnown RBP11.27□□□□□ -0.61
COL5A1-202ENST00000371820 AMHR2Q16671 573 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 RRAGBQ5VZM2 374 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 BMP8AQ7Z5Y6 402 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 DDX53Q86TM3 631 aaKnown RBP11.27□□□□□ -0.61
COL5A1-202ENST00000371820 DRC1Q96MC2 740 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 CARD6Q9BX69 1037 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 SSX2IPQ9Y2D8 614 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
COL5A1-202ENST00000371820 TMEM221A6NGB7 291 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 M0R296 226 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 ACKR2O00590 384 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 PSMA7O14818 248 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 MFAP3LO75121 409 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 IPO7O95373 1038 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 NPTXRO95502 500 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 RPN1P04843 607 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 AFMP43652 599 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 ZXDAP98168 799 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 DMP1Q13316 513 aaPredicted RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 COBLL1Q53SF7 1204 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 HYIQ5T013 277 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 ANKRD54Q6NXT1 300 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 ALYREFQ86V81 257 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 VPS52Q8N1B4 723 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 MRPL43Q8N983 215 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 OR8K1Q8NGG5 319 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 CASP10Q92851 521 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 CALML4Q96GE6 196 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 IGSF21Q96ID5 467 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 GAD1Q99259 594 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 S1PR5Q9H228 398 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 FZD8Q9H461 694 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 HAUS4Q9H6D7 363 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
COL5A1-202ENST00000371820 KCND2Q9NZV8 630 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 FAN1Q9Y2M0 1017 aa11.26□□□□□ -0.61
COL5A1-202ENST00000371820 KMT2EQ8IZD2 1858 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 ARL5CA6NH57 179 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 NT5C1B-RDH14C9J2C7 533 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 E9PMD0 336 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 B4GALT5O43286 388 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CXCL14O95715 111 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 POMCP01189 267 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CTSAP10619 480 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 HOXB8P17481 243 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CYLC1P35663 651 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-202ENST00000371820 MLH1P40692 756 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 STAT6P42226 847 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 SLC11A1P49279 550 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 CLCN6P51797 869 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 COPB1P53618 953 aaKnown RBP11.25□□□□□ -0.61
COL5A1-202ENST00000371820 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
COL5A1-202ENST00000371820 GRIK3Q13003 919 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 ECM1Q16610 540 aa11.25□□□□□ -0.61
COL5A1-202ENST00000371820 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms