RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 CLNKQ7Z7G1 428 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 APLFQ8IW19 511 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ZC3H3Q8IXZ2 948 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 NMD3Q96D46 503 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 PPM1HQ9ULR3 514 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 TMCO1Q9UM00 188 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 XRCC5P13010 732 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 CDK7P50613 346 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC34A1Q06495 639 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 UNC13DQ70J99 1090 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 NLRX1Q86UT6 975 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SCFD1Q8WVM8 642 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 THAP2Q9H0W7 228 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ASCC2Q9H1I8 757 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 USP29Q9HBJ7 922 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 EMILIN3Q9NT22 766 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ZBTB39O15060 712 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF189O75820 626 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 GSTA2P09210 222 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 PYGMP11217 842 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 GK3PQ14409 553 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 RASA3Q14644 834 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 HS2ST1Q7LGA3 356 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SRRM1Q8IYB3 904 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SNRNP27Q8WVK2 155 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 RAB3IPQ96QF0 476 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 RBM38Q9H0Z9 239 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 ALG13Q9NP73 1137 aaKnown RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 FBXO6Q9NRD1 293 aaPredicted RBP9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 PCYOX1Q9UHG3 505 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 SPATA31A1Q5TZJ5 1347 aa9.29□□□□□ -0.92
SMARCA1-203ENST00000371123 MAP1BP46821 2468 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 CAPN15O75808 1086 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 MTMR2Q13614 643 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 SFT2D3Q587I9 215 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 OLFML2BQ68BL8 750 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PLA2G12BQ9BX93 195 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PITPNM3Q9BZ71 974 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 NSRP1Q9H0G5 558 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 RMI1Q9H9A7 625 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 KLHL11Q9NVR0 708 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 TAS2R1Q9NYW7 299 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 STARD13Q9Y3M8 1113 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 POC1B-GALNT4F8VUJ3 575 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 EDF1O60869 148 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 ALDH2P05091 517 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PIM1P11309 404 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 AKR1B1P15121 316 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 VAV1P15498 845 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 GALK1P51570 392 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 CBX3Q13185 183 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 IQCDQ96DY2 449 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 MPP4Q96JB8 637 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 BTBD6Q96KE9 485 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 MTMR9Q96QG7 549 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 ZNF184Q99676 751 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 FAM192AQ9GZU8 254 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 ARHGEF38Q9NXL2 777 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 GGA1Q9UJY5 639 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 DNM3Q9UQ16 869 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 HEY1Q9Y5J3 304 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 RSPH10B2B2RC85 870 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 NCANO14594 1321 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 RSPH10BP0C881 870 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PABPC4LP0CB38 370 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PTPN4P29074 926 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 RPA3P35244 121 aaPredicted RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PRKCIP41743 596 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 DYNLT1P63172 113 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 OVGP1Q12889 678 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 COASYQ13057 564 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 EPHA7Q15375 998 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 BSPRYQ5W0U4 402 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 KRT25Q7Z3Z0 450 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PASD1Q8IV76 773 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 ADGRA3Q8IWK6 1321 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 LRRC37BQ96QE4 947 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PANX3Q96QZ0 392 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 PITPNM2Q9BZ72 1349 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 KLHL14Q9P2G3 628 aa9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 STX18Q9P2W9 335 aaKnown RBP9.28□□□□□ -0.92
SMARCA1-203ENST00000371123 GOLGA8SH3BPF8 625 aa9.27□□□□□ -0.92
SMARCA1-203ENST00000371123 GOLGA8MH3BSY2 632 aa9.27□□□□□ -0.92
SMARCA1-203ENST00000371123 MARK3P27448 753 aa9.27□□□□□ -0.92
SMARCA1-203ENST00000371123 CDC16Q13042 620 aa9.27□□□□□ -0.92
SMARCA1-203ENST00000371123 EEPD1Q7L9B9 569 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms