RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CELF4Q9BZC1 486 aaKnown RBP18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 TRIM15Q9C019 465 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 UBN1Q9NPG3 1134 aa18.02■□□□□ 0.48
TRAPPC11-201ENST00000334690 MAGEB2O15479 319 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 ADORA2BP29275 332 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 LONRF1Q17RB8 773 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 SCN4BQ8IWT1 228 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 FAM205AQ6ZU69 1335 aa18.02■□□□□ 0.47
TRAPPC11-201ENST00000334690 EXTL3O43909 919 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 KYNUQ16719 465 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 SLC13A5Q86YT5 568 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 FAM161BQ96MY7 647 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 CENPKQ9BS16 269 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 DUSP10Q9Y6W6 482 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 KITP10721 976 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 KCNJ1P48048 391 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 POLE2P56282 527 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 AP2B1P63010 937 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 TSTA3Q13630 321 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 STYK1Q6J9G0 422 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 ANKMY2Q8IV38 441 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 FGD4Q96M96 766 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 SUDS3Q9H7L9 328 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 KIF20BQ96Q89 1820 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 PHF20L1A8MW92 1017 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 GSTA4O15217 222 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 APRTP07741 180 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 MAPK7Q13164 816 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 PIP4K2CQ8TBX8 421 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 MCEEQ96PE7 176 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 RAB6BQ9NRW1 208 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 ELF1P32519 619 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 SSTR3P32745 418 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 RUSC1Q9BVN2 902 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 EHD4Q9H223 541 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 KLHL11Q9NVR0 708 aa18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.01■□□□□ 0.47
TRAPPC11-201ENST00000334690 DNAJC8O75937 253 aaPredicted RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 KIF19Q2TAC6 998 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 MICALL2Q8IY33 904 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 GIPC2Q8TF65 315 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 GPRASP2Q96D09 838 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 SEC16BQ96JE7 1060 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 PABPC3Q9H361 631 aaKnown RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 SMYD3Q9H7B4 428 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 NDE1Q9NXR1 346 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 GTSE1Q9NYZ3 720 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 PXDNQ92626 1479 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 KCNN4O15554 427 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 PPFIA2O75334 1257 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 COILP38432 576 aaPredicted RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 RPS6P62753 249 aaKnown RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 SLC29A2Q14542 456 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 TEDDM1Q5T9Z0 273 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 ADGRA1Q86SQ6 560 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 INPP5FQ9Y2H2 1132 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 AP3B1O00203 1094 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 MAGEA4P43358 317 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 SERPINB4P48594 390 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 TMTC4Q5T4D3 741 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 IL17RAQ96F46 866 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZDHHC15Q96MV8 337 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZSWIM1Q9BR11 485 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 RSAD1Q9HA92 442 aa18■□□□□ 0.47
TRAPPC11-201ENST00000334690 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
TRAPPC11-201ENST00000334690 IL18RAPO95256 599 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 NFKBIAP25963 317 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 HSD17B3P37058 310 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 GIT2Q14161 759 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 MTHFD1LQ6UB35 978 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 EXT2Q93063 718 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 GMCL1Q96IK5 515 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 EPAS1Q99814 870 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZC3H7BQ9UGR2 993 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 TBX20Q9UMR3 447 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 SNX9Q9Y5X1 595 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 TMEM120BA0PK00 339 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 FOXN3O00409 490 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 NVLO15381 856 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 PYGBP11216 843 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 GZMAP12544 262 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 YWHAHQ04917 246 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 IER5Q5VY09 327 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 TRIML2Q8N7C3 387 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 FEZF2Q8TBJ5 459 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 CCDC124Q96CT7 223 aaKnown RBP17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 CYFIP2Q96F07 1278 aa17.99■□□□□ 0.47
TRAPPC11-201ENST00000334690 ZBTB18Q99592 522 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms