RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PRPF39Q86UA1 669 aaKnown RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ZNF786Q8N393 782 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 PCYOX1LQ8NBM8 494 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 WDR36Q8NI36 951 aaKnown RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 USP10Q14694 798 aaKnown RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 CDKL3Q8IVW4 592 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 WWP1Q9H0M0 922 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 GREM2Q9H772 168 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 PRRG1O14668 218 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 TTC33Q6PID6 262 aaPredicted RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 HSPA9P38646 679 aaKnown RBP17.19■□□□□ 0.34
PTCH1-201ENST00000331920 TOMM20Q15388 145 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 FAM47DPA6NHR8 397 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 CYP7B1O75881 506 aa17.19■□□□□ 0.34
PTCH1-201ENST00000331920 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ACTR2P61160 394 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 PGS1Q32NB8 556 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 GALNTL6Q49A17 601 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 FAM45BPQ6NSW5 357 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 LRRC49Q8IUZ0 686 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 DENND6AQ8IWF6 608 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 PANX2Q96RD6 677 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 SERHL2Q9H4I8 314 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 SERHLQ9NQF3 203 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 PBLDP30039 288 aaPredicted RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 LRRC63Q05C16 580 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KRT73Q86Y46 540 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ATPAF2Q8N5M1 289 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 MDM1Q8TC05 714 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KIF2CQ99661 725 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 XPO7Q9UIA9 1087 aaKnown RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 CCDC188H7C350 402 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ARF4P18085 180 aaPredicted RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KIF23Q02241 960 aaPredicted RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KLC1Q07866 573 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 TYW3Q6IPR3 259 aaKnown RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 PDCD10Q9BUL8 212 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KRT6AP02538 564 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 MMP1P03956 469 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KRT6BP04259 564 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 KRT6CP48668 564 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ALCAMQ13740 583 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 CCNIQ14094 377 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 PIF1Q9H611 641 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.18■□□□□ 0.34
PTCH1-201ENST00000331920 SLC39A14Q15043 492 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 LEMD2Q8NC56 503 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
PTCH1-201ENST00000331920 SEMA3EO15041 775 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 TADA2AO75478 443 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 ATP1A1P05023 1023 aaKnown RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 AVPR1AP37288 418 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 KANSL2Q9H9L4 492 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 PCDHB6Q9Y5E3 794 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 KRT16P08779 473 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 UBASH3BQ8TF42 649 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 KLHL1Q9NR64 748 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 KCNK10P57789 538 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 CDK17Q00537 523 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 MTM1Q13496 603 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 SRLQ86TD4 932 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 OSBPL9Q96SU4 736 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 THUMPD3Q9BV44 507 aaKnown RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 SHCBP1LQ9BZQ2 653 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 CLEC4MQ9H2X3 399 aaPredicted RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 CCDC134Q9H6E4 229 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 AVENQ9NQS1 362 aaPredicted RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 DDX56Q9NY93 547 aaKnown RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 TRIM49BA6NDI0 452 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 TPST1O60507 370 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 PSMD7P51665 324 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 VAMP7P51809 220 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 DDX47Q9H0S4 455 aaKnown RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 LPIN1Q14693 890 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 ALKBH2Q6NS38 261 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 RMDN3Q96TC7 470 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 SEPT5Q99719 369 aaPredicted RBP17.17■□□□□ 0.34
PTCH1-201ENST00000331920 PUDPQ08623 228 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 GPR63Q9BZJ6 419 aa17.17■□□□□ 0.34
PTCH1-201ENST00000331920 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 DBR1Q9UK59 544 aaKnown RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 ARIH1Q9Y4X5 557 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 NCF1BA6NI72 391 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 NCF1CA8MVU1 366 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 ENO2P09104 434 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 NCF1P14598 390 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 GPC1P35052 558 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms