RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 NRDE2Q9H7Z3 1164 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 DDX18Q9NVP1 670 aaKnown RBP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 FADS3Q9Y5Q0 445 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 LINC00854A0A1B0GVQ3 168 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 EPHB6O15197 1021 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 ADAM23O75077 832 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 MCM7P33993 719 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 CUL1Q13616 776 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 DNAAF5Q86Y56 855 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 CEP70Q8NHQ1 597 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.94□□□□□ -0.66
SF3B2-201ENST00000322535 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 MIS12Q9H081 205 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 RXFP1Q9HBX9 757 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 TMEM260Q9NX78 707 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 CLIC5Q9NZA1 410 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 KLHL14Q9P2G3 628 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 HACL1Q9UJ83 578 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 ARL2BPQ9Y2Y0 163 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 QSER1Q2KHR3 1735 aa10.94□□□□□ -0.66
SF3B2-201ENST00000322535 FOXD2O60548 495 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ITGA4P13612 1032 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 UBAP2Q5T6F2 1119 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ISLR2Q6UXK2 745 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF662Q6ZS27 426 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 RBM46Q8TBY0 533 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 EPS8L3Q8TE67 593 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 WASF1Q92558 559 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ERP27Q96DN0 273 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 PPP1R10Q96QC0 940 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 CGREF1Q99674 301 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 NOC4LQ9BVI4 516 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 DENND2DQ9H6A0 471 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 TRPC7Q9HCX4 862 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 RNF181Q9P0P0 153 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 BTBD7Q9P203 1132 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 PDP2Q9P2J9 529 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 CEP350Q5VT06 3117 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 SIGLEC16A6NMB1 481 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 KRIT1O00522 736 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 FBP2O00757 339 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 OPHN1O60890 802 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 UNC5CO95185 931 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 AFPP02771 609 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 GLULP15104 373 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 KRT2P35908 639 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 VHLP40337 213 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 NAPAP54920 295 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 CTAG1AP78358 180 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 PCSK7Q16549 785 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 KCTD21Q4G0X4 260 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 KHDC1Q4VXA5 237 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 RILPL1Q5EBL4 403 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ANGEL2Q5VTE6 544 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ADGRF4Q8IZF3 695 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 CSGALNACT2Q8N6G5 542 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 GIMAP1Q8WWP7 306 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 GJA10Q969M2 543 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 DHX36Q9H2U1 1008 aaKnown RBP10.93□□□□□ -0.66
SF3B2-201ENST00000322535 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 FAIMQ9NVQ4 179 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 STOML1Q9UBI4 398 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 DOLKQ9UPQ8 538 aa10.93□□□□□ -0.66
SF3B2-201ENST00000322535 MTRF1O75570 445 aaKnown RBP10.92□□□□□ -0.66
SF3B2-201ENST00000322535 HSPA1AP0DMV8 641 aaKnown RBP10.92□□□□□ -0.66
SF3B2-201ENST00000322535 HSPA1BP0DMV9 641 aaKnown RBP10.92□□□□□ -0.66
SF3B2-201ENST00000322535 S100A1P23297 94 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 MMP13P45452 471 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 E2F2Q14209 437 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 CYTH1Q15438 398 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 KLHL35Q6PF15 583 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 LRRC49Q8IUZ0 686 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 SCAIQ8N9R8 606 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 NAT14Q8WUY8 206 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 ERP44Q9BS26 406 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 NUP85Q9BW27 656 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 MOSPD1Q9UJG1 213 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 ZBTB21Q9ULJ3 1066 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 STK36Q9NRP7 1315 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 A0A1W2PQC6 194 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 F5H6K3 240 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 CAPN9O14815 690 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 BIRC5O15392 142 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 TBCAO75347 108 aaKnown RBP10.92□□□□□ -0.66
SF3B2-201ENST00000322535 PDE5AO76074 875 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 CBX6O95503 412 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 CDK4P11802 303 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 CREB1P16220 341 aa10.92□□□□□ -0.66
SF3B2-201ENST00000322535 COPB2P35606 906 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms