RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ZNF700Q9H0M5 742 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 FEZ2Q9UHY8 353 aaPredicted RBP5.64□□□□□ -1.51
CCDC54-201ENST00000261058 CLCA2Q9UQC9 943 aa5.64□□□□□ -1.51
CCDC54-201ENST00000261058 MATN4O95460 622 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
CCDC54-201ENST00000261058 CACNB3P54284 484 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ICAM4Q14773 271 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 VPS72Q15906 364 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ZNF529Q6P280 563 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ANKRD35Q8N283 1001 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 NLGN4YQ8NFZ3 816 aaPredicted RBP5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ZFP28Q8NHY6 868 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 CXorf38Q8TB03 319 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 MTFMTQ96DP5 389 aaKnown RBP5.63□□□□□ -1.51
CCDC54-201ENST00000261058 MRGPRX1Q96LB2 322 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 NT5C1BQ96P26 610 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 CPPED1Q9BRF8 314 aaPredicted RBP5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ZMAT3Q9HA38 289 aaKnown RBP5.63□□□□□ -1.51
CCDC54-201ENST00000261058 RLIMQ9NVW2 624 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 JKAMPQ9P055 326 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 ZDHHC8Q9ULC8 765 aa5.63□□□□□ -1.51
CCDC54-201ENST00000261058 KLRG2A4D1S0 409 aaPredicted RBP5.62□□□□□ -1.51
CCDC54-201ENST00000261058 PRR5-ARHGAP8B1AHC4 643 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 H3BUI4 141 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 GOLIM4O00461 696 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 PHGDHO43175 533 aaKnown RBP5.62□□□□□ -1.51
CCDC54-201ENST00000261058 MFAP3LO75121 409 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 ZNF623O75123 536 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 SLC5A1P13866 664 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 SMARCA1P28370 1054 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 PIK3CGP48736 1102 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 ARFIP2P53365 341 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 UBXN2BQ14CS0 331 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 SAFBQ15424 915 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC54-201ENST00000261058 RNF220Q5VTB9 566 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 METRNLQ641Q3 311 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 DARS2Q6PI48 645 aaKnown RBP5.62□□□□□ -1.51
CCDC54-201ENST00000261058 APOA5Q6Q788 366 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 ZNF365Q70YC5 407 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 SYT12Q8IV01 421 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 KRT78Q8N1N4 520 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 TTC9BQ8N6N2 239 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 TFAP2CQ92754 450 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 EPC1Q9H2F5 836 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
CCDC54-201ENST00000261058 TCRBV7S2A1N4TA0A589 114 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 MYO1FO00160 1098 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 APAF1O14727 1248 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 HAUS5O94927 633 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 MAP4K4O95819 1239 aaPredicted RBP5.61□□□□□ -1.51
CCDC54-201ENST00000261058 POMCP01189 267 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 ALAS1P13196 640 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 MGAT1P26572 445 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 CREMQ03060 361 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 KIF22Q14807 665 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 NFIXQ14938 502 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 POLD3Q15054 466 aaPredicted RBP5.61□□□□□ -1.51
CCDC54-201ENST00000261058 KIAA0753Q2KHM9 967 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 CCDC93Q567U6 631 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 CCDC157Q569K6 752 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 ATXN7L2Q5T6C5 722 aaPredicted RBP5.61□□□□□ -1.51
CCDC54-201ENST00000261058 EFCAB12Q6NXP0 572 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 KSR2Q6VAB6 950 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 CCDC149Q6ZUS6 474 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 PDSS2Q86YH6 399 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 ZNF808Q8N4W9 903 aaPredicted RBP5.61□□□□□ -1.51
CCDC54-201ENST00000261058 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 IL31RAQ8NI17 732 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 LRTOMTQ8WZ04 291 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 C1orf43Q9BWL3 253 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 ARMT1Q9H993 441 aa5.61□□□□□ -1.51
CCDC54-201ENST00000261058 GNL3LQ9NVN8 582 aaKnown RBP5.61□□□□□ -1.51
CCDC54-201ENST00000261058 DRGXA6NNA5 263 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 ANXA1P04083 346 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 NPR1P16066 1061 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 ACO1P21399 889 aaKnown RBP5.6□□□□□ -1.51
CCDC54-201ENST00000261058 UBE4AQ14139 1066 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 R3HDM1Q15032 1099 aaKnown RBP5.6□□□□□ -1.51
CCDC54-201ENST00000261058 COBLL1Q53SF7 1204 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 UBE3BQ7Z3V4 1068 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 CCAR1Q8IX12 1150 aaKnown RBP5.6□□□□□ -1.51
CCDC54-201ENST00000261058 RNF169Q8NCN4 708 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 BRIX1Q8TDN6 353 aaKnown RBP5.6□□□□□ -1.51
CCDC54-201ENST00000261058 FAM89AQ96GI7 184 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 DPH1Q9BZG8 443 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
CCDC54-201ENST00000261058 CAPN14A8MX76 684 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 GRXCR1A8MXD5 290 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 KIAA0391O15091 583 aaKnown RBP5.59□□□□□ -1.51
CCDC54-201ENST00000261058 PEX2P28328 305 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 HHEXQ03014 270 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 TCF15Q12870 199 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 FAM102AQ5T9C2 384 aaPredicted RBP5.59□□□□□ -1.51
CCDC54-201ENST00000261058 Q6ZRM9 215 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 C11orf96Q7Z7L8 435 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 SH2D3CQ8N5H7 860 aa5.59□□□□□ -1.51
CCDC54-201ENST00000261058 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms