RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 YPL077CQ02831 240 aa-0.77□□□□□ -2.53
snR50snR50 TMA23Q03525 211 aa-0.77□□□□□ -2.53
snR50snR50 SEC10Q06245 871 aa-0.77□□□□□ -2.53
snR50snR50 ABP140Q08641 628 aaKnown RBP-0.77□□□□□ -2.53
snR50snR50 APC9Q12107 265 aa-0.77□□□□□ -2.53
snR50snR50 TFB5Q3E7C1 72 aaPredicted RBP-0.77□□□□□ -2.53
snR50snR50 ODC2Q99297 307 aa-0.77□□□□□ -2.53
snR50snR50 PDR18P53756 1333 aa-0.78□□□□□ -2.53
snR50snR50 MDM35O60200 86 aa-0.78□□□□□ -2.53
snR50snR50 YKL162CP36052 402 aa-0.78□□□□□ -2.53
snR50snR50 GTO1P48239 356 aa-0.78□□□□□ -2.53
snR50snR50 YNL146WP53906 100 aa-0.78□□□□□ -2.53
snR50snR50 YKR005CQ02203 525 aa-0.78□□□□□ -2.53
snR50snR50 PER33Q12144 273 aa-0.78□□□□□ -2.53
snR50snR50 YPR011CQ12251 326 aa-0.78□□□□□ -2.53
snR50snR50 SPO24Q3E752 67 aa-0.78□□□□□ -2.53
snR50snR50 YBL008W-AQ3E821 79 aa-0.78□□□□□ -2.53
snR50snR50 TAO3P40468 2376 aa-0.79□□□□□ -2.54
snR50snR50 ATP6P00854 259 aa-0.79□□□□□ -2.54
snR50snR50 SEC11P15367 167 aa-0.79□□□□□ -2.54
snR50snR50 AHT1P29589 182 aa-0.79□□□□□ -2.54
snR50snR50 ERG24P32462 438 aaKnown RBP-0.79□□□□□ -2.54
snR50snR50 SHE2P36068 246 aaKnown RBP RIP-Chip data-0.79□□□□□ -2.54not detected
snR50snR50 MSA2P36157 363 aa-0.79□□□□□ -2.54
snR50snR50 MRX3P38172 270 aa-0.79□□□□□ -2.54
snR50snR50 SER33P40510 469 aa-0.79□□□□□ -2.54
snR50snR50 COX16P47081 118 aa-0.79□□□□□ -2.54
snR50snR50 NBP35P52920 328 aa-0.79□□□□□ -2.54
snR50snR50 YGL159WP53110 370 aa-0.79□□□□□ -2.54
snR50snR50 ALG11P53954 548 aaKnown RBP-0.79□□□□□ -2.54
snR50snR50 VPS9P54787 451 aa-0.79□□□□□ -2.54
snR50snR50 BNA7Q04066 261 aa-0.79□□□□□ -2.54
snR50snR50 UPS1Q05776 175 aa-0.79□□□□□ -2.54
snR50snR50 ATG39Q06159 398 aa-0.79□□□□□ -2.54
snR50snR50 PBP4Q07362 185 aaKnown RBP-0.79□□□□□ -2.54
snR50snR50 NBL1Q3E7Y6 73 aa-0.79□□□□□ -2.54
snR50snR50 ATG40Q99325 256 aa-0.79□□□□□ -2.54
snR50snR50 CDC8P00572 216 aa-0.8□□□□□ -2.54
snR50snR50 DDR48P18899 430 aaKnown RBP-0.8□□□□□ -2.54
snR50snR50 YPT52P36018 234 aaKnown RBP-0.8□□□□□ -2.54
snR50snR50 UMP1P38293 148 aa-0.8□□□□□ -2.54
snR50snR50 SLM6P38343 150 aa-0.8□□□□□ -2.54
snR50snR50 YFL051CP43552 160 aa-0.8□□□□□ -2.54
snR50snR50 SRB7P47822 140 aa-0.8□□□□□ -2.54
snR50snR50 YNR077CP53758 84 aa-0.8□□□□□ -2.54
snR50snR50 YPL257WQ08974 193 aa-0.8□□□□□ -2.54
snR50snR50 FSF1Q12029 327 aaKnown RBP-0.8□□□□□ -2.54
snR50snR50 YOL013W-AP0C272 63 aaPredicted RBP-0.81□□□□□ -2.54
snR50snR50 RPL18AP0CX49 186 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 RPL18BP0CX50 186 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 DAL80P26343 269 aa-0.81□□□□□ -2.54
snR50snR50 SWD2P36104 329 aaPredicted RBP-0.81□□□□□ -2.54
snR50snR50 ECM33P38248 429 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 MNN9P39107 395 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 YER034WP40022 185 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 MOB1P40484 314 aa-0.81□□□□□ -2.54
snR50snR50 YIA6P40556 373 aa-0.81□□□□□ -2.54
snR50snR50 RPA43P46669 326 aa-0.81□□□□□ -2.54
snR50snR50 YJR015WP47090 510 aa-0.81□□□□□ -2.54
snR50snR50 YGL034CP53186 121 aa-0.81□□□□□ -2.54
snR50snR50 SWS2P53937 143 aa-0.81□□□□□ -2.54
snR50snR50 CUE4Q04201 117 aaPredicted RBP-0.81□□□□□ -2.54
snR50snR50 YDR124WQ04608 324 aa-0.81□□□□□ -2.54
snR50snR50 SEN15Q04675 128 aa-0.81□□□□□ -2.54
snR50snR50 YLR179CQ06252 201 aaKnown RBP-0.81□□□□□ -2.54
snR50snR50 YPR172WQ06608 200 aa-0.81□□□□□ -2.54
snR50snR50 ASR1Q06834 288 aa-0.81□□□□□ -2.54
snR50snR50 YPR013CQ12145 317 aa-0.81□□□□□ -2.54
snR50snR50 YFR032C-BQ8TGU2 87 aa-0.81□□□□□ -2.54
snR50snR50 YLR236CA0A023PZG4 107 aa-0.82□□□□□ -2.54
snR50snR50 RNR2P09938 399 aaKnown RBP-0.82□□□□□ -2.54
snR50snR50 SEN2P16658 377 aa-0.82□□□□□ -2.54
snR50snR50 MRPS28P21771 286 aa-0.82□□□□□ -2.54
snR50snR50 YCR001WP25347 104 aa-0.82□□□□□ -2.54
snR50snR50 SNC2P33328 115 aa-0.82□□□□□ -2.54
snR50snR50 HEK2P38199 381 aaKnown RBP RIP-Chip data-0.82□□□□□ -2.54not detected
snR50snR50 VMA22P38784 181 aa-0.82□□□□□ -2.54
snR50snR50 RPF1P38805 295 aaKnown RBP-0.82□□□□□ -2.54
snR50snR50 YMR141CP40211 102 aa-0.82□□□□□ -2.54
snR50snR50 LOH1P47055 219 aa-0.82□□□□□ -2.54
snR50snR50 MRH4P53166 561 aa-0.82□□□□□ -2.54
snR50snR50 SXM1Q04175 944 aaKnown RBP-0.82□□□□□ -2.54
snR50snR50 SPG3Q04398 127 aaPredicted RBP-0.82□□□□□ -2.54
snR50snR50 SYC1Q08553 188 aaPredicted RBP-0.82□□□□□ -2.54
snR50snR50 FYV12Q08559 129 aa-0.82□□□□□ -2.54
snR50snR50 YRA1Q12159 226 aaKnown RBP-0.82□□□□□ -2.54
snR50snR50 PSF1Q12488 208 aa-0.82□□□□□ -2.54
snR50snR50 DBF2P22204 572 aa-0.83□□□□□ -2.54
snR50snR50 SPO13P23624 291 aa-0.83□□□□□ -2.54
snR50snR50 ICL1P28240 557 aaPredicted RBP-0.83□□□□□ -2.54
snR50snR50 QRI5P32344 111 aa-0.83□□□□□ -2.54
snR50snR50 RPB7P34087 171 aa-0.83□□□□□ -2.54
snR50snR50 YAR068WP39564 161 aa-0.83□□□□□ -2.54
snR50snR50 YJL055WP47044 245 aa-0.83□□□□□ -2.54
snR50snR50 ABZ2Q03266 374 aa-0.83□□□□□ -2.54
snR50snR50 YMR226CQ05016 267 aaKnown RBP-0.83□□□□□ -2.54
snR50snR50 SFH1Q06168 426 aa-0.83□□□□□ -2.54
snR50snR50 FIT2Q08906 153 aa-0.83□□□□□ -2.54
snR50snR50 RAD28Q12021 506 aa-0.83□□□□□ -2.54
snR50snR50 SIA1Q12212 622 aa-0.83□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms