RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W SPL2P38839 148 aa2.86□□□□□ -1.95
HSH49YOR319W OST3P48439 350 aa2.86□□□□□ -1.95
HSH49YOR319W TOS8P53147 276 aa2.86□□□□□ -1.95
HSH49YOR319W HST4P53688 370 aa2.86□□□□□ -1.95
HSH49YOR319W YDR222WQ04925 415 aa2.86□□□□□ -1.95
HSH49YOR319W YOL019WQ08157 551 aa2.86□□□□□ -1.95
HSH49YOR319W SLD7Q08457 257 aa2.86□□□□□ -1.95
HSH49YOR319W YPR011CQ12251 326 aa2.86□□□□□ -1.95
HSH49YOR319W EMP46Q12396 444 aa2.86□□□□□ -1.95
HSH49YOR319W YPL247CQ12523 523 aa2.86□□□□□ -1.95
HSH49YOR319W YER189WP40104 122 aa2.85□□□□□ -1.95
HSH49YOR319W YFR045WP43617 309 aa2.85□□□□□ -1.95
HSH49YOR319W IRC18P47056 224 aa2.85□□□□□ -1.95
HSH49YOR319W ILM1P47155 203 aa2.85□□□□□ -1.95
HSH49YOR319W YPR172WQ06608 200 aa2.85□□□□□ -1.95
HSH49YOR319W PST1Q12355 444 aa2.85□□□□□ -1.95
HSH49YOR319W SWI1P09547 1314 aa2.85□□□□□ -1.95
HSH49YOR319W SEC22P22214 214 aa2.84□□□□□ -1.95
HSH49YOR319W RNP1P32385 249 aa2.84□□□□□ -1.95
HSH49YOR319W PEX17P40155 199 aa2.84□□□□□ -1.95
HSH49YOR319W NOP19P53317 196 aaPredicted RBP2.84□□□□□ -1.95
HSH49YOR319W ALG9P53868 555 aaKnown RBP2.84□□□□□ -1.95
HSH49YOR319W YML108WQ03759 105 aa2.84□□□□□ -1.95
HSH49YOR319W MRX4Q12467 430 aa2.84□□□□□ -1.95
HSH49YOR319W YCL012CQ8J0M4 134 aa2.84□□□□□ -1.95
HSH49YOR319W YPL229WQ99395 206 aa2.84□□□□□ -1.95
HSH49YOR319W DRS2P39524 1355 aa2.84□□□□□ -1.96
HSH49YOR319W MET2P08465 486 aa2.83□□□□□ -1.96
HSH49YOR319W AST1P35183 429 aa2.83□□□□□ -1.96
HSH49YOR319W YIR035CP40579 254 aa2.83□□□□□ -1.96
HSH49YOR319W ECO1P43605 281 aa2.83□□□□□ -1.96
HSH49YOR319W FAR8Q05040 523 aa2.83□□□□□ -1.96
HSH49YOR319W YPR063CQ12160 140 aa2.83□□□□□ -1.96
HSH49YOR319W RAD9P14737 1309 aa2.83□□□□□ -1.96
HSH49YOR319W TUS1Q06412 1307 aa2.83□□□□□ -1.96
HSH49YOR319W YLR462WO13556 202 aa2.82□□□□□ -1.96
HSH49YOR319W QCR7P00128 127 aa2.82□□□□□ -1.96
HSH49YOR319W COX5AP00424 153 aa2.82□□□□□ -1.96
HSH49YOR319W IPP1P00817 287 aaKnown RBP2.82□□□□□ -1.96
HSH49YOR319W TOM40P23644 387 aaKnown RBP2.82□□□□□ -1.96
HSH49YOR319W ADE1P27616 306 aa2.82□□□□□ -1.96
HSH49YOR319W SRY1P36007 326 aa2.82□□□□□ -1.96
HSH49YOR319W PRY2P36110 329 aa2.82□□□□□ -1.96
HSH49YOR319W YCR087C-AP37263 153 aa2.82□□□□□ -1.96
HSH49YOR319W YEL075CP39972 122 aa2.82□□□□□ -1.96
HSH49YOR319W BXI1P48558 297 aa2.82□□□□□ -1.96
HSH49YOR319W MIG2P53035 382 aa2.82□□□□□ -1.96
HSH49YOR319W RMR1P53060 241 aa2.82□□□□□ -1.96
HSH49YOR319W HOP2P53187 214 aa2.82□□□□□ -1.96
HSH49YOR319W YLR179CQ06252 201 aaKnown RBP2.82□□□□□ -1.96
HSH49YOR319W MSA1Q08471 629 aa2.82□□□□□ -1.96
HSH49YOR319W LSO2Q3E772 92 aaKnown RBP2.82□□□□□ -1.96
HSH49YOR319W QCR6P00127 147 aa2.81□□□□□ -1.96
HSH49YOR319W CDC28P00546 298 aaKnown RBP2.81□□□□□ -1.96
HSH49YOR319W APA2P22108 325 aa2.81□□□□□ -1.96
HSH49YOR319W DBF2P22204 572 aa2.81□□□□□ -1.96
HSH49YOR319W TKL2P33315 681 aa2.81□□□□□ -1.96
HSH49YOR319W TRM5P38793 499 aa2.81□□□□□ -1.96
HSH49YOR319W BMT5P40493 336 aa2.81□□□□□ -1.96
HSH49YOR319W BUD13P46947 266 aaPredicted RBP2.81□□□□□ -1.96
HSH49YOR319W MDM34P53083 459 aa2.81□□□□□ -1.96
HSH49YOR319W SYF2P53277 215 aaPredicted RBP2.81□□□□□ -1.96
HSH49YOR319W PDR17P53844 350 aa2.81□□□□□ -1.96
HSH49YOR319W YDR248CQ03786 193 aa2.81□□□□□ -1.96
HSH49YOR319W NOT5Q12514 560 aaPredicted RBP2.81□□□□□ -1.96
HSH49YOR319W APS1P35181 156 aa2.8□□□□□ -1.96
HSH49YOR319W YER034WP40022 185 aaKnown RBP2.8□□□□□ -1.96
HSH49YOR319W YIL059CP40520 121 aa2.8□□□□□ -1.96
HSH49YOR319W YIL001WP40560 513 aa2.8□□□□□ -1.96
HSH49YOR319W CAT5P41735 233 aa2.8□□□□□ -1.96
HSH49YOR319W YGL159WP53110 370 aa2.8□□□□□ -1.96
HSH49YOR319W PRM8P53174 237 aa2.8□□□□□ -1.96
HSH49YOR319W ERV29P53337 310 aa2.8□□□□□ -1.96
HSH49YOR319W FCF1Q05498 189 aaPredicted RBP2.8□□□□□ -1.96
HSH49YOR319W INM2Q05533 292 aa2.8□□□□□ -1.96
HSH49YOR319W HTL1Q9URQ5 78 aa2.8□□□□□ -1.96
HSH49YOR319W ATP7P30902 174 aa2.79□□□□□ -1.96
HSH49YOR319W ERG24P32462 438 aaKnown RBP2.79□□□□□ -1.96
HSH49YOR319W SPS18P32572 300 aa2.79□□□□□ -1.96
HSH49YOR319W ECM14P38836 430 aa2.79□□□□□ -1.96
HSH49YOR319W FAR7P43592 221 aa2.79□□□□□ -1.96
HSH49YOR319W DID2P69771 204 aa2.79□□□□□ -1.96
HSH49YOR319W ABF2Q02486 183 aa2.79□□□□□ -1.96
HSH49YOR319W YMR279CQ03263 540 aa2.79□□□□□ -1.96
HSH49YOR319W YML096WQ04489 525 aa2.79□□□□□ -1.96
HSH49YOR319W YLR030WQ07967 263 aa2.79□□□□□ -1.96
HSH49YOR319W GEP5Q12393 293 aa2.79□□□□□ -1.96
HSH49YOR319W HIS3P06633 220 aa2.78□□□□□ -1.96
HSH49YOR319W SGA1P08019 549 aa2.78□□□□□ -1.96
HSH49YOR319W GCN3P14741 305 aa2.78□□□□□ -1.96
HSH49YOR319W OAC1P32332 324 aa2.78□□□□□ -1.96
HSH49YOR319W YPT52P36018 234 aaKnown RBP2.78□□□□□ -1.96
HSH49YOR319W GRE3P38715 327 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
HSH49YOR319W COS8P38723 381 aa2.78□□□□□ -1.96
HSH49YOR319W EGD2P38879 174 aaKnown RBP2.78□□□□□ -1.96
HSH49YOR319W GTR2P53290 341 aa2.78□□□□□ -1.96
HSH49YOR319W GRH1Q04410 372 aaKnown RBP2.78□□□□□ -1.96
HSH49YOR319W YDR114CQ04597 100 aa2.78□□□□□ -1.96
HSH49YOR319W YPL257WQ08974 193 aa2.78□□□□□ -1.96
HSH49YOR319W GPM2Q12008 311 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms