RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C IES3Q12345 250 aa2.57□□□□□ -2
RRP42YDL111C EMP46Q12396 444 aa2.57□□□□□ -2
RRP42YDL111C YBL112CQ3E7Y4 105 aa2.57□□□□□ -2
RRP42YDL111C SIR4P11978 1358 aa2.57□□□□□ -2
RRP42YDL111C NUP157P40064 1391 aaKnown RBP2.57□□□□□ -2
RRP42YDL111C ZWF1P11412 505 aaKnown RBP2.56□□□□□ -2
RRP42YDL111C PPH21P23594 369 aa2.56□□□□□ -2
RRP42YDL111C TOS8P53147 276 aa2.56□□□□□ -2
RRP42YDL111C EMI1Q04406 187 aa2.56□□□□□ -2
RRP42YDL111C YPR172WQ06608 200 aa2.56□□□□□ -2
RRP42YDL111C PST1Q12355 444 aa2.56□□□□□ -2
RRP42YDL111C QCR6P00127 147 aa2.55□□□□□ -2
RRP42YDL111C MET2P08465 486 aa2.55□□□□□ -2
RRP42YDL111C RNP1P32385 249 aa2.55□□□□□ -2
RRP42YDL111C PAN1P32521 1480 aa2.55□□□□□ -2
RRP42YDL111C YDR222WQ04925 415 aa2.55□□□□□ -2
RRP42YDL111C SLD7Q08457 257 aa2.55□□□□□ -2
RRP42YDL111C YPR011CQ12251 326 aa2.55□□□□□ -2
RRP42YDL111C MRX4Q12467 430 aa2.55□□□□□ -2
RRP42YDL111C YPL247CQ12523 523 aa2.55□□□□□ -2
RRP42YDL111C YCL012CQ8J0M4 134 aa2.55□□□□□ -2
RRP42YDL111C YPL229WQ99395 206 aa2.55□□□□□ -2
RRP42YDL111C TUS1Q06412 1307 aa2.54□□□□□ -2
RRP42YDL111C YLR462WO13556 202 aa2.54□□□□□ -2
RRP42YDL111C QCR7P00128 127 aa2.54□□□□□ -2
RRP42YDL111C AST1P35183 429 aa2.54□□□□□ -2
RRP42YDL111C SRY1P36007 326 aa2.54□□□□□ -2
RRP42YDL111C YEL075CP39972 122 aa2.54□□□□□ -2
RRP42YDL111C PEX17P40155 199 aa2.54□□□□□ -2
RRP42YDL111C YIR035CP40579 254 aa2.54□□□□□ -2
RRP42YDL111C NOP19P53317 196 aaPredicted RBP2.54□□□□□ -2
RRP42YDL111C PDR17P53844 350 aa2.54□□□□□ -2
RRP42YDL111C ALG9P53868 555 aaKnown RBP2.54□□□□□ -2
RRP42YDL111C DID2P69771 204 aa2.54□□□□□ -2
RRP42YDL111C FAR8Q05040 523 aa2.54□□□□□ -2
RRP42YDL111C YOL019WQ08157 551 aa2.54□□□□□ -2
RRP42YDL111C YPR063CQ12160 140 aa2.54□□□□□ -2
RRP42YDL111C LSO2Q3E772 92 aaKnown RBP2.54□□□□□ -2
RRP42YDL111C RAD9P14737 1309 aa2.53□□□□□ -2
RRP42YDL111C COX5AP00424 153 aa2.53□□□□□ -2
RRP42YDL111C IPP1P00817 287 aaKnown RBP2.53□□□□□ -2
RRP42YDL111C SEC22P22214 214 aa2.53□□□□□ -2
RRP42YDL111C TOM40P23644 387 aaKnown RBP2.53□□□□□ -2
RRP42YDL111C ADE1P27616 306 aa2.53□□□□□ -2
RRP42YDL111C PRY2P36110 329 aa2.53□□□□□ -2
RRP42YDL111C YCR087C-AP37263 153 aa2.53□□□□□ -2
RRP42YDL111C TRM5P38793 499 aa2.53□□□□□ -2
RRP42YDL111C BMT5P40493 336 aa2.53□□□□□ -2
RRP42YDL111C BXI1P48558 297 aa2.53□□□□□ -2
RRP42YDL111C MIG2P53035 382 aa2.53□□□□□ -2
RRP42YDL111C RMR1P53060 241 aa2.53□□□□□ -2
RRP42YDL111C HOP2P53187 214 aa2.53□□□□□ -2
RRP42YDL111C DRS2P39524 1355 aa2.52□□□□□ -2.01
RRP42YDL111C SWI1P09547 1314 aa2.52□□□□□ -2.01
RRP42YDL111C CDC28P00546 298 aaKnown RBP2.52□□□□□ -2.01
RRP42YDL111C ATP7P30902 174 aa2.52□□□□□ -2.01
RRP42YDL111C TKL2P33315 681 aa2.52□□□□□ -2.01
RRP42YDL111C EGD2P38879 174 aaKnown RBP2.52□□□□□ -2.01
RRP42YDL111C YER034WP40022 185 aaKnown RBP2.52□□□□□ -2.01
RRP42YDL111C YIL001WP40560 513 aa2.52□□□□□ -2.01
RRP42YDL111C CAT5P41735 233 aa2.52□□□□□ -2.01
RRP42YDL111C FAR7P43592 221 aa2.52□□□□□ -2.01
RRP42YDL111C ECO1P43605 281 aa2.52□□□□□ -2.01
RRP42YDL111C BUD13P46947 266 aaPredicted RBP2.52□□□□□ -2.01
RRP42YDL111C MDM34P53083 459 aa2.52□□□□□ -2.01
RRP42YDL111C SYF2P53277 215 aaPredicted RBP2.52□□□□□ -2.01
RRP42YDL111C ABF2Q02486 183 aa2.52□□□□□ -2.01
RRP42YDL111C YDR248CQ03786 193 aa2.52□□□□□ -2.01
RRP42YDL111C FCF1Q05498 189 aaPredicted RBP2.52□□□□□ -2.01
RRP42YDL111C INM2Q05533 292 aa2.52□□□□□ -2.01
RRP42YDL111C MSA1Q08471 629 aa2.52□□□□□ -2.01
RRP42YDL111C NOT5Q12514 560 aaPredicted RBP2.52□□□□□ -2.01
RRP42YDL111C HTL1Q9URQ5 78 aa2.52□□□□□ -2.01
RRP42YDL111C APA2P22108 325 aa2.51□□□□□ -2.01
RRP42YDL111C DBF2P22204 572 aa2.51□□□□□ -2.01
RRP42YDL111C APS1P35181 156 aa2.51□□□□□ -2.01
RRP42YDL111C COS8P38723 381 aa2.51□□□□□ -2.01
RRP42YDL111C YGL159WP53110 370 aa2.51□□□□□ -2.01
RRP42YDL111C PRM8P53174 237 aa2.51□□□□□ -2.01
RRP42YDL111C YMR279CQ03263 540 aa2.51□□□□□ -2.01
RRP42YDL111C YML096WQ04489 525 aa2.51□□□□□ -2.01
RRP42YDL111C SGA1P08019 549 aa2.5□□□□□ -2.01
RRP42YDL111C GCN3P14741 305 aa2.5□□□□□ -2.01
RRP42YDL111C ERG24P32462 438 aaKnown RBP2.5□□□□□ -2.01
RRP42YDL111C YPT52P36018 234 aaKnown RBP2.5□□□□□ -2.01
RRP42YDL111C ECM14P38836 430 aa2.5□□□□□ -2.01
RRP42YDL111C RSM25P40496 264 aa2.5□□□□□ -2.01
RRP42YDL111C GTR2P53290 341 aa2.5□□□□□ -2.01
RRP42YDL111C ERV29P53337 310 aa2.5□□□□□ -2.01
RRP42YDL111C GRH1Q04410 372 aaKnown RBP2.5□□□□□ -2.01
RRP42YDL111C YLR030WQ07967 263 aa2.5□□□□□ -2.01
RRP42YDL111C YPL257WQ08974 193 aa2.5□□□□□ -2.01
RRP42YDL111C GEP5Q12393 293 aa2.5□□□□□ -2.01
RRP42YDL111C YOR020W-AQ3E824 90 aa2.5□□□□□ -2.01
RRP42YDL111C HIS3P06633 220 aa2.49□□□□□ -2.01
RRP42YDL111C KSS1P14681 368 aa2.49□□□□□ -2.01
RRP42YDL111C RCN1P36054 211 aa2.49□□□□□ -2.01
RRP42YDL111C MRPL28P36527 147 aa2.49□□□□□ -2.01
RRP42YDL111C GRE3P38715 327 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
RRP42YDL111C RPF1P38805 295 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms