RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF408Q9H9D4 720 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 UNCXA6NJT0 531 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 TTLL13PA6NNM8 815 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 ATMINO43313 823 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 TXNP10599 105 aaKnown RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 BRSK2Q8IWQ3 736 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 UBL4BQ8N7F7 174 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 ZNF564Q8TBZ8 553 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 GTF3C2Q8WUA4 911 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 CHORDC1Q9UHD1 332 aaPredicted RBP21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 PNMA3Q9UL41 463 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 TRPC6Q9Y210 931 aa21.14■□□□□ 0.98
PCDHB11-202ENST00000624887 ASB14A6NK59 587 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 FAM189A1O60320 539 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 SRGAP2CP0DJJ0 459 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 UNGP13051 313 aaPredicted RBP21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 ACO1P21399 889 aaKnown RBP21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 COMTP21964 271 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 CYP2C19P33261 490 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 TTLL4Q14679 1199 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 MESDQ14696 234 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 SPOPLQ6IQ16 392 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 MAATS1Q7Z4T9 603 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 ZBTB8OSQ8IWT0 167 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 LRRC71Q8N4P6 559 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 COPS5Q92905 334 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 SLC10A4Q96EP9 437 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 ACO2Q99798 780 aaKnown RBP21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 ZSWIM1Q9BR11 485 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 SMARCAD1Q9H4L7 1026 aa21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 APOBEC3GQ9HC16 384 aaKnown RBP21.14■□□□□ 0.97
PCDHB11-202ENST00000624887 RNF40O75150 1001 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 PHACTR2O75167 634 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 GRM1Q13255 1194 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 CUL1Q13616 776 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 CUL2Q13617 745 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 ALS2CLQ60I27 953 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 RNF149Q8NC42 400 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 TSEN2Q8NCE0 465 aaKnown RBP21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 CCDC26Q8TAB7 109 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 WHAMMQ8TF30 809 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 CD101Q93033 1021 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 WNT8AQ9H1J5 351 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 C2orf40Q9H1Z8 148 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 EFCC1Q9HA90 598 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 PSD3Q9NYI0 1048 aa21.13■□□□□ 0.97
PCDHB11-202ENST00000624887 PRKCBP05771 671 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 FAM153BP0C7A2 387 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 CYP2C8P10632 490 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 HARSP12081 509 aaKnown RBP21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 AP3M2P53677 418 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 TRADDQ15628 312 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 PPP2R5EQ16537 467 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 MAPK6Q16659 721 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 FAM153CQ494X1 144 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 SEZ6Q53EL9 994 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 MREGQ8N565 214 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 KRT35Q92764 455 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 PDGFCQ9NRA1 345 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 FAM153AQ9UHL3 310 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 TMEM110-MUSTN1A8MSY1 372 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 CALCAP01258 141 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 TBXAS1P24557 533 aaPredicted RBP21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 PEX5P50542 639 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 POU5F1Q01860 360 aaKnown RBP21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 RIN2Q8WYP3 895 aaPredicted RBP21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 AMACRQ9UHK6 382 aa21.12■□□□□ 0.97
PCDHB11-202ENST00000624887 HBP1O60381 514 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 CLTAP09496 248 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 PTENP60484 403 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 MCL1Q07820 350 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 ZNF211Q13398 564 aaPredicted RBP21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 NCOA4Q13772 614 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 TMEM63BQ5T3F8 832 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 WDR49Q8IV35 697 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 GPRC5AQ8NFJ5 357 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 TCHPQ9BT92 498 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 CNTN6Q9UQ52 1028 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 NR2E1Q9Y466 385 aa21.11■□□□□ 0.97
PCDHB11-202ENST00000624887 GOLGA6L10A0A0M3HER8 536 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 ABLIM1O14639 778 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 OGTO15294 1046 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 TNFSF9P41273 254 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 NOP14P78316 857 aaKnown RBP21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 ARMCX2Q7L311 632 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 ZBTB33Q86T24 672 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 RHPN2Q8IUC4 686 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 CYP1A1P04798 512 aaPredicted RBP21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 ECHS1P30084 290 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 MARCKSL1P49006 195 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 FKBP1BP68106 108 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 MCOLN2Q8IZK6 566 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 SEC14L1Q92503 715 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 TRIM11Q96F44 468 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 BTBD6Q96KE9 485 aa21.1■□□□□ 0.97
PCDHB11-202ENST00000624887 SH3GL2Q99962 352 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms