RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 CGRRF1Q99675 332 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 NXF3Q9H4D5 531 aaKnown RBP8.11□□□□□ -1.11
VPS45-213ENST00000618148 TMEM8AQ9HCN3 771 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 PDE11AQ9HCR9 933 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 RGS18Q9NS28 235 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 FAM105AQ9NUU6 356 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 TMEM39AQ9NV64 488 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 DERAQ9Y315 318 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 IPPQ9Y573 584 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 PCDHB2Q9Y5E7 798 aa8.11□□□□□ -1.11
VPS45-213ENST00000618148 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TRIM43BA6NCK2 446 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 RECQL4O94761 1208 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TIMP1P01033 207 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 C4BPAP04003 597 aaKnown RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 CXCL8P10145 99 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 SKIP12755 728 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 KCNE1P15382 129 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 ATF7P17544 494 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 MATR3P43243 847 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS45-213ENST00000618148 UBXN1Q04323 297 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 NFX1Q12986 1120 aaKnown RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 TBX2Q13207 712 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 ZBTB6Q15916 424 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CBWD6Q4V339 395 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 EPC2Q52LR7 807 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 SEZ6Q53EL9 994 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 DCAF17Q5H9S7 520 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 FIGNQ5HY92 759 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CBWD3Q5JTY5 395 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CBWD5Q5RIA9 395 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 SMYD5Q6GMV2 418 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TWF2Q6IBS0 349 aaKnown RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 RTN4RL1Q86UN2 441 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 LMO3Q8TAP4 145 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CXorf38Q8TB03 319 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TRIM43Q96BQ3 446 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 TTYH3Q9C0H2 523 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TMEM117Q9H0C3 514 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 RPF1Q9H9Y2 349 aaKnown RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 PLCB1Q9NQ66 1216 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 TOPORSQ9NS56 1045 aaPredicted RBP8.1□□□□□ -1.11
VPS45-213ENST00000618148 C1orf112Q9NSG2 853 aa8.1□□□□□ -1.11
VPS45-213ENST00000618148 CITO14578 2027 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 LTBP2Q14767 1821 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 ZSCAN20P17040 1043 aaPredicted RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 ITGB8P26012 769 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 CYP2C18P33260 490 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 MXI1P50539 228 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 SPECC1LQ69YQ0 1117 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 KRT39Q6A163 491 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 MFSD5Q6N075 450 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 SLC24A5Q71RS6 500 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 SV2AQ7L0J3 742 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 ECHDC2Q86YB7 292 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 EFCAB13Q8IY85 973 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 DBF4BQ8NFT6 615 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 SEPT8Q92599 483 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 CCDC127Q96BQ5 260 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 IQCDQ96DY2 449 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 FNBP1Q96RU3 617 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 ADAM2Q99965 735 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 ZBED2Q9BTP6 218 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 TRIM6Q9C030 488 aaPredicted RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 ELAC1Q9H777 363 aaKnown RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 SNTG2Q9NY99 539 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 FBXL5Q9UKA1 691 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 GIT1Q9Y2X7 761 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 HES2Q9Y543 173 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 PDCD11Q14690 1871 aaKnown RBP8.09□□□□□ -1.11
VPS45-213ENST00000618148 SCN5AQ14524 2016 aa8.09□□□□□ -1.11
VPS45-213ENST00000618148 LACTBL1A8MY62 500 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 EOMESO95936 686 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 PFKMP08237 780 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 NFICP08651 508 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 DLATP10515 647 aaKnown RBP8.08□□□□□ -1.12
VPS45-213ENST00000618148 PON1P27169 355 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 GCLMP48507 274 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 YARSP54577 528 aaKnown RBP8.08□□□□□ -1.12
VPS45-213ENST00000618148 MYL7Q01449 175 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 CCDC173Q0VFZ6 552 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 ARID5BQ14865 1188 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 LAPTM4AQ15012 233 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 SYCP1Q15431 976 aa8.08□□□□□ -1.12
VPS45-213ENST00000618148 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms