RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 OLFML3Q9NRN5 406 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 KRT37O76014 449 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 IFNAR2P48551 515 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 RBP5P82980 135 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 CXCL9Q07325 125 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 ZC3H12BQ5HYM0 836 aaKnown RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 C6orf203Q9P0P8 240 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 FAF1Q9UNN5 650 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 ATP8A1Q9Y2Q0 1164 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 CCDC188H7C350 402 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 CXCL11O14625 94 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 RNASEH1O60930 286 aaKnown RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 CD4P01730 458 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-219ENST00000606715 L3MBTL1Q9Y468 752 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 SNX9Q9Y5X1 595 aa11.65□□□□□ -0.54
SHANK2-219ENST00000606715 HOXA2O43364 376 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.55
SHANK2-219ENST00000606715 GCKP35557 465 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 ARL4CP56559 192 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 TPI1P60174 286 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 GPC5P78333 572 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 MFSD4BQ5TF39 518 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 ZNF746Q6NUN9 644 aaPredicted RBP11.65□□□□□ -0.55
SHANK2-219ENST00000606715 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.55
SHANK2-219ENST00000606715 SYNGAP1Q96PV0 1343 aa11.65□□□□□ -0.55
SHANK2-219ENST00000606715 SUN1O94901 812 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PAN2Q504Q3 1202 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PPP1R13BQ96KQ4 1090 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 C7orf25Q9BPX7 421 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 MROH1Q8NDA8 1641 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PITPNM2Q9BZ72 1349 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 A0A087WWV3 80 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 A0A1W2PQC6 194 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 IL18RAPO95256 599 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 CDKL3Q8IVW4 592 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PCSK9Q8NBP7 692 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 RAPGEF5Q92565 580 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SLITRK1Q96PX8 696 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 LRRC37BQ96QE4 947 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SLC25A13Q9UJS0 675 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 KPNA7A9QM74 516 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 KPNA6O60684 536 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 E2F6O75461 281 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 ZRANB2O95218 330 aaKnown RBP eCLIP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 RAG1P15918 1043 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 PATL1Q86TB9 770 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 VPS11Q9H270 941 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SYNPO2Q9UMS6 1093 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 H7C4K7 107 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SUPT20HL2P0C7V6 817 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 ACADMP11310 421 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 NT5DC4Q86YG4 428 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 SEPT8Q92599 483 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 CHCHD3Q9NX63 227 aaKnown RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-219ENST00000606715 TMX2Q9Y320 296 aa11.64□□□□□ -0.55
SHANK2-219ENST00000606715 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 WDR91A4D1P6 747 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 MAP2K2P36507 400 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 BLVRAP53004 296 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 TAGAPQ8N103 731 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 POLD4Q9HCU8 107 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 BFARQ9NZS9 450 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 EEF1B2P24534 225 aaKnown RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 FXR2P51116 673 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 BCAR1P56945 870 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 KDELC2Q7Z4H8 507 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 RASSF3Q86WH2 238 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 RTFDC1Q9BY42 306 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 INTS2Q9H0H0 1204 aaKnown RBP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 MED4Q9NPJ6 270 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ADAMTS1Q9UHI8 967 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 ENC1O14682 589 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 NKRFO15226 690 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHANK2-219ENST00000606715 KRT7P08729 469 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 RPA1P27694 616 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 PCSK1P29120 753 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 INHBEP58166 350 aa11.63□□□□□ -0.55
SHANK2-219ENST00000606715 E2F5Q15329 346 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms