RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
SMAD4-214ENST00000592186 UBQLN1Q9UMX0 589 aaKnown RBP11.56□□□□□ -0.56
SMAD4-214ENST00000592186 R3HCC1Q9Y3T6 440 aaKnown RBP11.56□□□□□ -0.56
SMAD4-214ENST00000592186 INSL6Q9Y581 213 aa11.56□□□□□ -0.56
SMAD4-214ENST00000592186 ALPK3Q96L96 1907 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 PMM2O15305 246 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 P4HA2O15460 535 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 GJB5O95377 273 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 TNNC2P02585 160 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 ATP2A2P16615 1042 aaKnown RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 IBSPP21815 317 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 PAX3P23760 479 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 RPL9P32969 192 aaKnown RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 MLH1P40692 756 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 RNASELQ05823 741 aaKnown RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 GRIK3Q13003 919 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 MAN2A1Q16706 1144 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 FILIP1LQ4L180 1135 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 CLLU1OSQ5K130 101 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 TCERG1LQ5VWI1 586 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 GSTCDQ8NEC7 633 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 BEST2Q8NFU1 509 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 HELQQ8TDG4 1101 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 SLC35C1Q96A29 364 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 ANKRD36BP1Q96IX9 119 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 ZFP42Q96MM3 310 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 UROC1Q96N76 676 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
SMAD4-214ENST00000592186 RAD9AQ99638 391 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 CGRRF1Q99675 332 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 INTS13Q9NVM9 706 aa11.55□□□□□ -0.56
SMAD4-214ENST00000592186 TBKBP1A7MCY6 615 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 MEIS3P2A8K0S8 358 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 PTGESO14684 152 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 SERPINC1P01008 464 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 TPM3P06753 285 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 TMEM191BP0C7N4 346 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 FGFR1P11362 822 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 DEFB103AP81534 67 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 HTRA4P83105 476 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 TFAMQ00059 246 aaKnown RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 SHHQ15465 462 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 VWA3BQ502W6 1294 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 DCAF17Q5H9S7 520 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 KRT39Q6A163 491 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 GAS2L3Q86XJ1 694 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 CMTR2Q8IYT2 770 aaKnown RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 ZNF689Q96CS4 500 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 CASD1Q96PB1 797 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 PPP1R10Q96QC0 940 aaKnown RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 YME1L1Q96TA2 773 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 HSD3B7Q9H2F3 369 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 RNF19AQ9NV58 838 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 DPP3Q9NY33 737 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 CXXC1Q9P0U4 656 aaPredicted RBP11.54□□□□□ -0.56
SMAD4-214ENST00000592186 ITGA11Q9UKX5 1188 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 INPP5FQ9Y2H2 1132 aa11.54□□□□□ -0.56
SMAD4-214ENST00000592186 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
SMAD4-214ENST00000592186 LRRIQ3A6PVS8 624 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-214ENST00000592186 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-214ENST00000592186 PHACTR2O75167 634 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 POMCP01189 267 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 ALDH2P05091 517 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 SCNN1GP51170 649 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 DLG4P78352 724 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 RBP5P82980 135 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 KCNH2Q12809 1159 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 TUSC3Q13454 348 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
SMAD4-214ENST00000592186 KRT31Q15323 416 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 FKBP15Q5T1M5 1219 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 LRRC43Q8N309 656 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
SMAD4-214ENST00000592186 TMEM175Q9BSA9 504 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 NDST4Q9H3R1 872 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 MIOSQ9NXC5 875 aa11.53□□□□□ -0.56
SMAD4-214ENST00000592186 SCN5AQ14524 2016 aa11.52□□□□□ -0.56
SMAD4-214ENST00000592186 LTBP2Q14767 1821 aa11.52□□□□□ -0.56
SMAD4-214ENST00000592186 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-214ENST00000592186 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.52□□□□□ -0.57
SMAD4-214ENST00000592186 CBFA2T2O43439 604 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 TLL1O43897 1013 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
SMAD4-214ENST00000592186 NFICP08651 508 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 ATP1A3P13637 1013 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 LRPAP1P30533 357 aa11.52□□□□□ -0.57
SMAD4-214ENST00000592186 PNPLA4P41247 253 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms